DNA_packaging_tegument_protein_UL25

Euk-Vir

Equid_alphaherpesvirus_3

DNA_packaging_tegument_protein_UL25__YP_009054940__Equid_alphaherpesvirus_3__80341

Identity

73.4 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_3

TaxID: 80341

View cluster (77 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 158-233_380-417_449-491_503-595

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	113.3	1.80e-32	46.0%	21.4%
PF01499.22	Herpes_UL25	75.9	3.70e-21	31.2%	12.8%
PF01499.22	Herpes_UL25	35.5	6.40e-09	16.4%	7.0%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.63	24.0	3.92e-01	83.6%	94.3%
1u84A00	1.10.340.20	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain	0.58	20.0	3.50e-01	71.2%	93.8%
1i5nB00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.50	24.0	3.41e-01	78.8%	91.1%
3ay5A01	1.20.1420.10	Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain	0.50	25.0	3.43e-01	72.4%	90.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
185949	3424.1.1.1 ↗	alpha arrays › Virion protein UL25 › Virion protein UL25 › Virion protein UL25 › Herpes_UL25	0.93	91.0	7.37e-01	98.8%	95.6%

D2 medium residues 234-335_358-379

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL25__YP_010085894__Wood_mouse_herpesvirus__432370__D202-318

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	71.4	8.60e-20	100.0%	25.1%