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DNA_packaging_tegument_protein_UL25
Euk-VirAteline_alphaherpesvirus_1
DNA_packaging_tegument_protein_UL25__YP_009361913__Ateline_alphaherpesvirus_1__35243
Identity
- Accession:
- YP_009361913 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL25
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Ateline_alphaherpesvirus_1
TaxID: 35243
Cluster
View cluster (77 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 232-388
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_010085894__Wood_mouse_herpesvirus__432370__D202-318
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 137.6 | 7.60e-40 | 100.0% | 29.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 29.0 | 3.69e-01 | 87.3% | 87.4% |
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.53 | 26.0 | 3.09e-01 | 93.6% | 67.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185949 | 3424.1.1.1 ↗ | alpha arrays › Virion protein UL25 › Virion protein UL25 › Virion protein UL25 › Herpes_UL25 | 0.93 | 84.0 | 5.88e-01 | 100.0% | 35.1% |
| 3752759 | 109.4.1.395 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fanconi_C | 0.54 | 39.0 | 3.58e-01 | 74.5% | 94.3% |
| 5059237 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.54 | 40.0 | 3.06e-01 | 76.4% | 93.8% |
| 4945764 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.52 | 37.0 | 3.60e-01 | 100.0% | 65.9% |
| 4977777 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 31.0 | 3.48e-01 | 79.0% | 78.3% |
D2
medium
residues 55-104
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 25.5 | 6.90e-06 | 100.0% | 8.3% |
D3
medium
residues 152-229_454-473_489-579
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_009054940__Equid_alphaherpesvirus_3__80341__D158-233_380-417_449-491_503-595
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 58.7 | 6.00e-16 | 47.6% | 18.0% |
| PF01499.22 | Herpes_UL25 | 72.1 | 5.20e-20 | 42.3% | 12.8% |