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DNA_packaging_tegument_protein_UL25
Euk-VirEquid_alphaherpesvirus_1
DNA_packaging_tegument_protein_UL25__YP_053082__Equid_alphaherpesvirus_1__10326
Identity
- Accession:
- YP_053082 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL25
- Kingdom:
- euk
Quality
73.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_1
TaxID: 10326
Cluster
View cluster (77 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 285-392
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 79.4 | 3.30e-22 | 100.0% | 18.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7egfc01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.53 | 27.0 | 2.96e-01 | 73.1% | 55.8% |
| 1kx5A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.53 | 30.0 | 2.81e-01 | 100.0% | 41.5% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.52 | 25.0 | 3.36e-01 | 100.0% | 84.7% |
| 3dxiA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 39.0 | 2.97e-01 | 86.1% | 76.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4874430 | 148.1.1.17 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-T_C | 0.62 | 30.0 | 3.34e-01 | 71.3% | 56.0% |
| 4142118 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.60 | 31.0 | 2.98e-01 | 100.0% | 42.4% |
| 4015740 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.59 | 29.0 | 2.85e-01 | 97.2% | 40.9% |
| 3736214 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.59 | 29.0 | 2.79e-01 | 75.0% | 39.2% |
D2
medium
residues 155-175_408-443_550-587
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.62 | 25.0 | 2.86e-01 | 98.9% | 45.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4127496 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.63 | 25.0 | 2.76e-01 | 98.9% | 42.7% |
| 3974580 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.52 | 45.0 | 3.04e-01 | 100.0% | 73.9% |