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DNA_packaging_tegument_protein

Euk-Vir

Murine_roseolovirus

DNA_packaging_tegument_protein__YP_009344909__Murine_roseolovirus__1940555

Identity

Accession:
YP_009344909 ↗
Protein ID:
DNA_packaging_tegument_protein
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Murine_roseolovirus

TaxID: 1940555

Cluster

View cluster (39 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-127_203-243
PDB
Domain cluster: rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04559.18 best Herpes_UL17 25.2 1.00e-05 75.6% 27.3%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ofyD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 35.0 4.55e-01 88.1% 81.2%
5f7uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 37.0 4.46e-01 87.5% 75.7%
2dliA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 35.0 4.50e-01 88.1% 84.7%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 39.0 4.77e-01 88.1% 88.5%
1cd9B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 37.0 4.65e-01 86.9% 88.8%
7ahsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 32.0 4.37e-01 86.9% 87.5%
2wngA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 37.0 4.55e-01 88.1% 85.0%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 34.0 4.45e-01 86.9% 89.0%
3e8vA00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.66 34.0 4.70e-01 76.2% 100.0%
2p9rA00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.66 35.0 4.33e-01 89.3% 82.4%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 35.0 4.48e-01 86.9% 90.4%
1nepA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 39.0 4.44e-01 88.1% 76.9%
4mjjA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.65 39.0 4.64e-01 77.4% 86.2%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 34.0 4.24e-01 88.7% 82.2%
2a74A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.64 35.0 4.34e-01 88.1% 86.1%
2yd1A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 33.0 4.18e-01 88.1% 83.8%
5tfmA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.64 33.0 4.24e-01 87.5% 85.7%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 36.0 4.35e-01 88.7% 86.6%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.61 47.0 5.15e-01 84.5% 100.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 32.0 4.05e-01 73.8% 86.3%
5vt8C01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.61 32.0 3.98e-01 88.1% 82.2%
1tvdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 4.42e-01 88.7% 88.8%
5k3xA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 36.0 4.30e-01 87.5% 87.6%
7cymA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.60 33.0 4.14e-01 87.5% 90.7%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 35.0 4.21e-01 88.7% 87.4%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.59 34.0 3.83e-01 87.5% 70.1%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 33.0 3.44e-01 88.7% 56.0%
3isyA00 2.60.40.2360 Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI 0.59 36.0 4.30e-01 88.1% 88.9%
4l1dC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 34.0 4.18e-01 87.5% 89.0%
5uz8A01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.58 31.0 3.85e-01 88.7% 83.3%
5dzvA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.58 31.0 3.82e-01 89.9% 80.4%
1ymmE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 4.31e-01 88.1% 89.7%
5szrA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.58 31.0 3.77e-01 88.7% 80.0%
4bsjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 4.11e-01 88.1% 83.7%
4kkpA01 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 36.0 4.19e-01 90.5% 86.7%
1hxmB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 37.0 4.29e-01 88.7% 88.0%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.57 44.0 4.41e-01 92.3% 79.2%
4pqqA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 34.0 3.55e-01 88.1% 63.5%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 35.0 4.10e-01 86.9% 88.2%
5lf5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 4.11e-01 87.5% 90.5%
3wuzA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 3.99e-01 89.3% 86.7%
4r7vA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 4.15e-01 88.7% 81.9%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.54 30.0 3.56e-01 85.7% 80.2%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 4.28e-01 88.7% 86.8%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.54 31.0 3.46e-01 87.5% 71.3%
1kvdB00 3.30.44.10 Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain 0.54 23.0 3.24e-01 89.9% 83.1%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 31.0 3.33e-01 87.5% 64.4%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.52 37.0 4.02e-01 88.7% 85.8%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.52 46.0 4.09e-01 94.6% 70.1%
7tzeA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.92e-01 86.9% 95.4%
4bs9A03 3.30.1330.230 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.51 24.0 2.59e-01 95.2% 49.0%
8begA03 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 33.0 3.50e-01 76.8% 72.5%
6dgiA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 33.0 3.51e-01 71.4% 75.0%
3uizB00 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.50 35.0 3.81e-01 89.3% 88.1%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967966 11.1.1.246 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.76 37.0 5.05e-01 86.9% 87.8%
4969133 11.1.1.246 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.76 37.0 4.86e-01 88.1% 83.2%
3232689 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.75 36.0 4.72e-01 87.5% 81.1%
5021902 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 38.0 4.85e-01 88.7% 84.0%
5044832 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 36.0 4.55e-01 89.3% 78.1%
3243030 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.71 35.0 4.52e-01 88.1% 80.0%
3913489 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.70 36.0 4.35e-01 88.1% 73.0%
4963510 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 35.0 4.69e-01 88.7% 88.9%
5034970 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 36.0 4.53e-01 88.1% 82.0%
3878829 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.69 34.0 4.41e-01 88.1% 82.1%
5056079 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 33.0 4.24e-01 87.5% 78.9%
4933927 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 36.0 4.38e-01 88.1% 77.3%
3992061 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.68 37.0 3.69e-01 71.4% 50.0%
3885347 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.67 37.0 4.57e-01 92.3% 84.8%
3865999 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.67 38.0 4.12e-01 91.1% 64.1%
4969147 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 35.0 4.46e-01 88.7% 85.0%
3581471 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 37.0 4.54e-01 88.1% 83.6%
3855829 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 36.0 4.07e-01 89.3% 68.0%
3871067 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.66 37.0 3.53e-01 88.7% 46.8%
3883234 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 34.0 4.34e-01 88.1% 85.3%
3863258 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.66 38.0 4.68e-01 88.7% 89.5%
3551034 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.66 35.0 4.39e-01 87.5% 82.9%
4947736 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 36.0 4.05e-01 88.7% 66.7%
4938050 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 33.0 4.28e-01 87.5% 84.2%
3423873 11.1.1.214 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N 0.65 42.0 4.83e-01 91.7% 89.2%
3572245 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.65 33.0 4.24e-01 86.9% 83.0%
4103311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 42.0 4.87e-01 88.7% 91.7%
3473036 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 36.0 4.09e-01 89.3% 72.8%
3719812 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.64 45.0 5.01e-01 86.9% 93.1%
3486031 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.63 40.0 4.64e-01 87.5% 89.2%
4025518 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 40.0 4.61e-01 74.4% 86.4%
3880668 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.62 36.0 4.32e-01 88.7% 85.5%
3258809 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 46.0 5.12e-01 88.7% 98.5%
3494540 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.62 36.0 3.91e-01 88.1% 66.2%
3368419 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.61 47.0 4.98e-01 86.9% 92.4%
4588326 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 42.0 4.60e-01 94.0% 86.7%
5055502 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 39.0 4.36e-01 78.6% 82.2%
3422139 11.1.1.214 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N 0.60 37.0 4.34e-01 92.3% 88.7%
3779151 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.59 36.0 4.29e-01 88.1% 87.8%
3197930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 39.0 4.13e-01 89.3% 74.7%
3226534 11.2.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2-C2_1 0.59 47.0 5.01e-01 90.5% 97.2%
4026901 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 32.0 3.77e-01 88.7% 74.2%
5054920 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 3.90e-01 77.4% 70.0%
5018610 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 36.0 4.20e-01 88.1% 85.8%
4467869 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 4.38e-01 85.7% 93.0%
3706034 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 43.0 4.70e-01 86.3% 93.6%
4950006 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.58 41.0 4.55e-01 91.1% 90.4%
3416171 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.58 34.0 4.01e-01 87.5% 81.7%
3840179 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 35.0 4.10e-01 88.1% 84.2%
1643 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.58 37.0 4.31e-01 88.7% 88.6%
5078373 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 4.18e-01 88.1% 84.8%
4950625 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 38.0 4.37e-01 92.3% 90.4%
4408923 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 37.0 3.90e-01 91.7% 71.0%
3566216 11.2.1.22 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › CC2D2AN-C2 0.57 46.0 4.88e-01 89.3% 98.6%
3476658 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 4.37e-01 87.5% 87.4%
5043945 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 32.0 3.91e-01 88.7% 85.7%
3924674 11.1.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida 0.57 36.0 3.99e-01 86.9% 79.3%
3919818 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.56 32.0 3.78e-01 88.7% 80.0%
3580431 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.56 46.0 4.25e-01 86.9% 78.6%
3700926 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 45.0 4.53e-01 87.5% 90.5%
3401623 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 45.0 4.14e-01 88.1% 70.9%
3600073 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 35.0 3.95e-01 88.7% 85.6%
3890583 11.2.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2-C2_1 0.54 46.0 4.70e-01 93.5% 93.3%
3899539 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.54 36.0 3.83e-01 89.3% 76.6%
3232211 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.54 48.0 4.45e-01 95.8% 93.8%
4944742 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 4.49e-01 86.3% 98.5%
3426064 11.1.1.855 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26102 0.54 44.0 4.53e-01 90.5% 90.0%
3389645 11.1.1.819 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTHB1_GAE 0.53 35.0 3.82e-01 94.0% 80.7%
5056879 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.53 39.0 4.30e-01 91.1% 92.1%
5056414 11.18.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in metallo-endopeptidase BACOVA_00663 › N-terminal domain in metallo-endopeptidase BACOVA_00663 0.53 38.0 4.31e-01 88.7% 96.2%
3607549 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 43.0 3.95e-01 88.7% 98.7%
2528413 11.1.5.39 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4466 0.52 36.0 3.98e-01 88.1% 85.6%
3759458 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.52 46.0 4.41e-01 95.8% 95.3%
4000317 1.1.8.8 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III 0.51 32.0 3.78e-01 83.3% 95.5%
D2 high residues 252-428
PDB
Domain cluster: rep: DNA_packaging_tegument_protein_UL17__YP_009388533__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D344-532
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04559.18 best Herpes_UL17 84.5 1.10e-23 91.5% 31.9%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 20.0 3.36e-01 71.8% 89.8%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 22.0 2.99e-01 80.8% 71.0%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.54 30.0 3.15e-01 89.3% 58.5%
2kgyA00 3.30.505.20 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › 0.52 26.0 3.47e-01 75.1% 91.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944335 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.55 22.0 3.02e-01 78.5% 71.0%
4947558 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 21.0 2.94e-01 78.5% 71.1%