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DNA_packaging_terminase_subunit_1
Euk-VirBovine_alphaherpesvirus_1
DNA_packaging_terminase_subunit_1__NP_045342__Bovine_alphaherpesvirus_1__10320
Identity
- Accession:
- NP_045342 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
75.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
bovine_alphaherpesvirus_1
TaxID: 10320
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 482-726
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 290.7 | 2.30e-86 | 100.0% | 64.7% |
D2
medium
residues 8-147
D3
medium
residues 249-409
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 28.7 | 1.40e-06 | 93.2% | 65.1% |
| PF02500.23 | DNA_pack_N | 173.3 | 1.20e-50 | 60.2% | 36.2% |
| PF02499.23 | DNA_pack_C | 51.3 | 1.40e-13 | 24.2% | 11.1% |
D4
medium
residues 410-481