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DNA_packaging_terminase_subunit_1

Euk-Vir

Gallid_alphaherpesvirus_3

DNA_packaging_terminase_subunit_1__NP_066845__Gallid_alphaherpesvirus_3__35250

Identity

Accession:
NP_066845 ↗
Protein ID:
DNA_packaging_terminase_subunit_1
Kingdom:
euk

Quality

70.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Gallid_alphaherpesvirus_3

TaxID: 35250

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 498-733
PDB
Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02499.23 best DNA_pack_C 296.1 5.20e-88 100.0% 63.5%
D2 medium residues 162-182_207-255
PDB
Domain cluster: rep: DNA_packaging_terminase_subunit_1__NP_073308__Meleagrid_alphaherpesvirus_1__37108__D159-254
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02500.23 best DNA_pack_N 74.5 1.70e-20 100.0% 27.7%
D3 medium residues 256-418
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02500.23 best DNA_pack_N 172.0 3.00e-50 59.5% 36.2%
PF02499.23 DNA_pack_C 56.5 3.50e-15 25.1% 11.7%
D4 medium residues 419-497
PDB