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DNA_packaging_terminase_subunit_1

Euk-Vir

Cercopithecine_alphaherpesvirus_9

DNA_packaging_terminase_subunit_1__NP_077457__Cercopithecine_alphaherpesvirus_9__35246

Identity

Accession:
NP_077457 ↗
Protein ID:
DNA_packaging_terminase_subunit_1
Kingdom:
euk

Quality

68.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Cercopithecine_alphaherpesvirus_9

TaxID: 35246

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 490-738
PDB
Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02499.23 best DNA_pack_C 303.6 2.60e-90 100.0% 66.1%
D2 medium residues 72-91_147-185_207-258
PDB
Domain cluster: rep: DNA_packaging_terminase_subunit__YP_009664663__Bubaline_alphaherpesvirus_1__202910__D78-109_155-175_202-250
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02500.23 best DNA_pack_N 97.2 2.00e-27 100.0% 36.2%
D3 medium residues 259-422
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF05127.22 best NAT10_TcmA_helicase 23.1 8.60e-05 94.5% 67.8%
PF03237.22 Terminase_6N 32.2 1.20e-07 90.8% 65.1%
PF02500.23 DNA_pack_N 164.0 8.40e-48 59.2% 36.2%
PF02499.23 DNA_pack_C 64.3 1.50e-17 25.6% 12.0%
D4 medium residues 423-482
PDB