DNA_packaging_terminase_subunit_1

Euk-Vir

Panine_betaherpesvirus_2

DNA_packaging_terminase_subunit_1__NP_612722__Panine_betaherpesvirus_2__188763

Identity

73.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Panine_betaherpesvirus_2

TaxID: 188763

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 448-611_644-670

PDB

Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	230.7	3.80e-68	87.4%	45.9%

D2 medium residues 120-202

PDB

Domain cluster: rep: putative_terminase__YP_009344911__Murine_roseolovirus__1940555__D119-184

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	85.0	1.00e-23	100.0%	29.5%

D3 medium residues 203-361

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	32.3	1.10e-07	89.3%	63.3%
PF02500.23	DNA_pack_N	162.1	3.20e-47	60.4%	36.2%
PF02499.23	DNA_pack_C	41.1	1.70e-10	23.9%	10.8%

D4 medium residues 419-447_612-643

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_004940252__Saimiriine_betaherpesvirus_4__1535247__D425-441_605-646