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DNA_packaging_terminase_subunit_1
Euk-VirEquid_alphaherpesvirus_9
DNA_packaging_terminase_subunit_1__YP_002333526__Equid_alphaherpesvirus_9__55744
Identity
- Accession:
- YP_002333526 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
72.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_9
TaxID: 55744
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 418-465
D2
high
residues 497-729
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 309.6 | 4.10e-92 | 100.0% | 61.5% |
D3
medium
residues 4-23_41-150
D4
medium
residues 252-413
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 27.6 | 3.10e-06 | 92.6% | 65.1% |
| PF02500.23 | DNA_pack_N | 172.0 | 3.10e-50 | 59.9% | 36.2% |
| PF02499.23 | DNA_pack_C | 57.5 | 1.90e-15 | 24.7% | 11.4% |