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DNA_packaging_terminase_subunit_1
Euk-VirHuman_herpesvirus_5
DNA_packaging_terminase_subunit_1__YP_002608281__Human_herpesvirus_5__10359
Identity
- Accession:
- YP_002608281 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Human_betaherpesvirus_5
TaxID: 10359
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 433-673
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 320.7 | 1.70e-95 | 99.6% | 65.5% |
D2
medium
residues 43-55_105-145
D3
medium
residues 146-205
D4
medium
residues 206-364
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 33.9 | 3.60e-08 | 88.0% | 63.7% |
| PF02500.23 | DNA_pack_N | 160.7 | 8.20e-47 | 59.8% | 35.8% |
| PF02499.23 | DNA_pack_C | 43.3 | 3.70e-11 | 24.5% | 11.1% |
D5
medium
residues 365-432