DNA_packaging_terminase_subunit_1

Euk-Vir

Cercopithecine_betaherpesvirus_5

DNA_packaging_terminase_subunit_1__YP_004936056__Cercopithecine_betaherpesvirus_5__50292

Identity

72.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cercopithecine_betaherpesvirus_5

TaxID: 50292

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 203-386

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	33.8	3.90e-08	77.2%	63.3%
PF02500.23	DNA_pack_N	161.2	6.00e-47	52.2%	36.2%
PF02499.23	DNA_pack_C	90.0	2.40e-25	34.2%	17.9%

D2 high residues 446-604_646-669

PDB

Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	227.9	2.70e-67	96.7%	49.6%

D3 medium residues 110-202

PDB

Domain cluster: rep: putative_terminase__YP_009344911__Murine_roseolovirus__1940555__D119-184

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	91.4	1.10e-25	100.0%	32.8%

D4 medium residues 420-445_605-645

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_004940252__Saimiriine_betaherpesvirus_4__1535247__D425-441_605-646

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	41.6	1.20e-10	67.2%	12.0%