DNA_packaging_terminase_subunit_1

Euk-Vir

Aotine_betaherpesvirus_1

DNA_packaging_terminase_subunit_1__YP_004940106__Aotine_betaherpesvirus_1__50290

Identity

71.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Aotine_betaherpesvirus_1

TaxID: 50290

View cluster (63 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 449-607_653-671

PDB

Domain cluster: rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	227.2	4.70e-67	98.9%	46.2%

D2 medium residues 28-66_87-104

PDB

D3 medium residues 105-205

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_081537__Human_betaherpesvirus_5__10359__D110-204

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	99.1	5.10e-28	100.0%	35.1%

D4 medium residues 206-343

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	34.6	2.20e-08	97.8%	63.3%
PF02500.23	DNA_pack_N	158.5	3.80e-46	68.8%	35.8%