DNA_packaging_terminase_subunit_1

Euk-Vir

Equid_alphaherpesvirus_3

DNA_packaging_terminase_subunit_1__YP_009054948__Equid_alphaherpesvirus_3__80341

Identity

69.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_3

TaxID: 80341

View cluster (63 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 485-731

PDB

Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	316.2	4.10e-94	100.0%	65.5%

D2 medium residues 160-178_205-254

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__NP_944422__Psittacid_alphaherpesvirus_1__50294__D199-219_264-310

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	74.5	1.60e-20	100.0%	27.3%

D3 medium residues 255-447

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (4)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	30.4	4.20e-07	90.7%	65.6%
PF05127.22	NAT10_TcmA_helicase	22.7	1.10e-04	86.5%	66.7%
PF02500.23	DNA_pack_N	172.1	2.80e-50	49.7%	35.8%
PF02499.23	DNA_pack_C	124.5	7.50e-36	37.3%	20.5%