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DNA_packaging_terminase_subunit_1
Euk-VirMacropodid_alphaherpesvirus_1
DNA_packaging_terminase_subunit_1__YP_009227248__Macropodid_alphaherpesvirus_1__137443
Identity
- Accession:
- YP_009227248 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Macropodid_alphaherpesvirus_1
TaxID: 137443
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 478-726
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 311.7 | 9.20e-93 | 100.0% | 68.7% |
D2
medium
residues 53-90_104-117
D3
medium
residues 249-413
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 22.4 | 1.20e-04 | 85.5% | 64.2% |
| PF02500.23 | DNA_pack_N | 167.7 | 6.10e-49 | 58.8% | 36.2% |
| PF02499.23 | DNA_pack_C | 58.6 | 8.40e-16 | 26.1% | 12.2% |
D4
medium
residues 414-477