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DNA_packaging_terminase_subunit_1
Euk-VirColumbid_alphaherpesvirus_1
DNA_packaging_terminase_subunit_1__YP_009352919__Columbid_alphaherpesvirus_1__93386
Identity
- Accession:
- YP_009352919 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
71.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Columbid_alphaherpesvirus_1
TaxID: 93386
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 507-743
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 293.8 | 2.50e-87 | 100.0% | 63.5% |
D2
medium
residues 265-425
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02500.23 best | DNA_pack_N | 165.9 | 2.20e-48 | 60.2% | 36.2% |
| PF02499.23 | DNA_pack_C | 51.3 | 1.40e-13 | 24.2% | 11.1% |
D3
medium
residues 426-482_494-506