DNA_packaging_terminase_subunit_1

Euk-Vir

Wood_mouse_herpesvirus

DNA_packaging_terminase_subunit_1__YP_010085904__Wood_mouse_herpesvirus__432370

Identity

73.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Wood_mouse_herpesvirus

TaxID: 432370

View cluster (63 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-132

PDB

D2 high residues 450-675

PDB

Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	279.2	7.30e-83	100.0%	63.2%

D3 medium residues 134-208

PDB

Domain cluster: rep: cleavage_packaging_protein__YP_004207870__Cricetid_gammaherpesvirus_2__1605972__D137-212

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	66.1	5.80e-18	100.0%	28.0%

D4 medium residues 209-374

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	31.8	1.50e-07	89.8%	57.2%
PF02500.23	DNA_pack_N	172.0	3.00e-50	59.0%	36.2%
PF02499.23	DNA_pack_C	61.1	1.40e-16	25.9%	12.2%

D5 medium residues 375-424

PDB