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DNA_packaging_terminase_subunit_1
Euk-VirCercopithecine_alphaherpesvirus_2
DNA_packaging_terminase_subunit_1__YP_164457__Cercopithecine_alphaherpesvirus_2__10317
Identity
- Accession:
- YP_164457 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
72.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Cercopithecine_alphaherpesvirus_2
TaxID: 10317
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-148
D2
high
residues 151-180_196-416
Domain cluster:
rep: ON548429__URC17385.1__X__00081__D11-200
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02500.23 best | DNA_pack_N | 275.8 | 6.50e-82 | 72.5% | 65.3% |
| PF02499.23 | DNA_pack_C | 67.2 | 2.10e-18 | 17.5% | 12.5% |
D3
high
residues 480-728
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 317.2 | 2.00e-94 | 100.0% | 68.4% |
D4
medium
residues 417-472