DNA_packaging_terminase_subunit_1

Euk-Vir

Gallid_alphaherpesvirus_1

DNA_packaging_terminase_subunit_1__YP_182378__Gallid_alphaherpesvirus_1__10386

Identity

69.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Iltovirus› Gallid_alphaherpesvirus_1

TaxID: 10386

View cluster (63 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 277-435

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	23.2	6.80e-05	94.3%	64.6%
PF02500.23	DNA_pack_N	162.4	2.60e-47	61.0%	36.2%
PF02499.23	DNA_pack_C	37.9	1.60e-09	23.3%	10.5%

D2 high residues 441-502

PDB

D3 medium residues 518-660_729-753

PDB

Domain cluster: rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	162.9	1.60e-47	85.7%	39.9%

D4 medium residues 661-728

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_009342389__Spheniscid_alphaherpesvirus_1__2560777__D482-494_642-654_668-707

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	69.8	3.30e-19	100.0%	18.2%