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DNA_packaging_terminase_subunit_1
Euk-VirPapiine_alphaherpesvirus_2
DNA_packaging_terminase_subunit_1__YP_443861__Papiine_alphaherpesvirus_2__340907
Identity
- Accession:
- YP_443861 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_1
- Kingdom:
- euk
Quality
73.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Papiine_alphaherpesvirus_2
TaxID: 340907
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 417-468
D2
medium
residues 251-413
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 22.7 | 9.50e-05 | 92.0% | 65.1% |
| PF02500.23 | DNA_pack_N | 170.8 | 6.90e-50 | 59.5% | 36.2% |
| PF02499.23 | DNA_pack_C | 59.2 | 5.50e-16 | 25.1% | 11.7% |
D3
medium
residues 480-589_622-668
Domain cluster:
rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02499.23 best | DNA_pack_C | 154.6 | 5.50e-45 | 71.3% | 31.1% |
| PF02499.23 | DNA_pack_C | 50.2 | 3.10e-13 | 29.9% | 12.8% |