DNA_packaging_terminase_subunit_2

Euk-Vir

Equid_alphaherpesvirus_4

DNA_packaging_terminase_subunit_2__NP_045249__Equid_alphaherpesvirus_4__10331

Identity

79.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_4

TaxID: 10331

View cluster (77 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-122

PDB

Domain cluster: rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	78.6	4.20e-22	93.0%	15.8%

D2 medium residues 123-210

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_009253944__Macaca_nemestrina_herpesvirus_7__1846169__D111-173

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	105.5	3.10e-30	100.0%	13.6%

D3 medium residues 253-270_294-382

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_009054935__Equid_alphaherpesvirus_3__80341__D240-271_328-381

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	66.7	1.70e-18	98.1%	15.1%

D4 medium residues 383-421_494-529

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2_UL28__YP_009230159__Leporid_alphaherpesvirus_4__481315__D318-334_397-443_483-524

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	40.3	1.60e-10	54.7%	5.6%
PF01366.24	PRTP	34.6	9.10e-09	53.3%	5.8%

D5 medium residues 561-587_698-766

PDB

Domain cluster: rep: terminase_subunit_2__YP_009179297__Elephant_endotheliotropic_herpesvirus_4__548914__D513-536_648-697

D6 medium residues 588-697

PDB

Domain cluster: rep: orf7__YP_009044394__Alcelaphine_gammaherpesvirus_2__138184__D511-616

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	116.2	1.80e-33	80.9%	13.4%