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DNA_packaging_terminase_subunit_2
Euk-VirCercopithecine_betaherpesvirus_5
DNA_packaging_terminase_subunit_2__YP_004936032__Cercopithecine_betaherpesvirus_5__50292
Identity
- Accession:
- YP_004936032 ↗
- Protein ID:
- DNA_packaging_terminase_subunit_2
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cercopithecine_betaherpesvirus_5
TaxID: 50292
Cluster
View cluster (77 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-121
Domain cluster:
rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01366.24 best | PRTP | 134.8 | 4.10e-39 | 97.5% | 18.0% |
D2
medium
residues 122-225_500-529
Domain cluster:
rep: GP56__YP_007417831__Caviid_betaherpesvirus_2__33706__D136-147_175-227_482-509
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01366.24 best | PRTP | 142.3 | 2.20e-41 | 76.9% | 15.2% |
D3
medium
residues 530-713
Domain cluster:
rep: DNA_packaging_terminase_subunit_2__YP_081515__Human_betaherpesvirus_5__10359__D575-765
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01366.24 best | PRTP | 162.1 | 2.20e-47 | 62.5% | 16.9% |