DNA_packaging_terminase_subunit_2

Euk-Vir

Columbid_alphaherpesvirus_1

DNA_packaging_terminase_subunit_2__YP_009352936__Columbid_alphaherpesvirus_1__93386

Identity

74.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Columbid_alphaherpesvirus_1

TaxID: 93386

View cluster (77 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 58-177

PDB

Domain cluster: rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	113.2	1.50e-32	95.8%	17.1%

D2 medium residues 282-319_382-475

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__NP_040153__Human_alphaherpesvirus_3__10335__D231-270_321-432_480-524

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	74.1	9.70e-21	81.8%	13.9%

D3 medium residues 629-642_773-859

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_009046526__Falconid_herpesvirus_1__1510155__D629-640_774-857

D4 medium residues 643-772

PDB

Domain cluster: rep: orf7__YP_009044394__Alcelaphine_gammaherpesvirus_2__138184__D511-616

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	144.7	4.20e-42	80.8%	15.8%