DNA_packaging_terminase_subunit_2

Euk-Vir

Papiine_alphaherpesvirus_2

DNA_packaging_terminase_subunit_2__YP_443875__Papiine_alphaherpesvirus_2__340907

Identity

79.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Papiine_alphaherpesvirus_2

TaxID: 340907

View cluster (77 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-205

PDB

Domain cluster: rep: HSV_ICP18.5_homolog__YP_214068__Murid_betaherpesvirus_1__10366__D5-201

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	191.6	2.70e-56	97.8%	27.0%

D2 medium residues 248-286_339-430

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_053077__Equid_alphaherpesvirus_1__10326__D247-267_332-417

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	81.4	6.20e-23	78.6%	14.2%

D3 medium residues 567-595_705-782

PDB

Domain cluster: rep: terminase_subunit_2__YP_009179297__Elephant_endotheliotropic_herpesvirus_4__548914__D513-536_648-697

D4 medium residues 596-704

PDB

Domain cluster: rep: orf7__YP_009044394__Alcelaphine_gammaherpesvirus_2__138184__D511-616

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	128.0	4.80e-37	83.5%	13.7%