DNA_packaging_tripartate_terminase_subunit

Euk-Vir

Bovine_gammaherpesvirus_6

DNA_packaging_tripartate_terminase_subunit__YP_009042007__Bovine_gammaherpesvirus_6__1504288

Identity

77.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Bovine_gammaherpesvirus_6

TaxID: 1504288

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-135

PDB

Domain cluster: rep: ORF29A__YP_010084577__Macaca_nemestrina_rhadinovirus_2__123630__D25-83_114-155

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	47.9	2.00e-12	84.7%	34.0%

D2 high residues 454-614_656-677

PDB

Domain cluster: rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	207.6	4.30e-61	88.5%	46.7%

D3 medium residues 152-202

PDB

Domain cluster: rep: terminase__YP_010087398__Vombatid_gammaherpesvirus_1__2052651__D164-213

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	60.8	2.40e-16	100.0%	19.9%

D4 medium residues 216-374

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	43.5	4.20e-11	95.0%	57.7%
PF02500.23	DNA_pack_N	174.0	7.20e-51	59.1%	34.7%
PF02499.23	DNA_pack_C	54.7	1.30e-14	25.2%	11.4%