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DNA_polymerase

Euk-Vir

Yaba_monkey_tumor_virus

DNA_polymerase__NP_938295__Yaba_monkey_tumor_virus__38804

Identity

Accession:: NP_938295 ↗
Protein ID:: DNA_polymerase
Kingdom:: euk

Quality

85.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Yatapoxvirus› Yaba_monkey_tumor_virus

TaxID: 38804

Cluster

View cluster (158 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 162-344

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03104.26 best	DNA_pol_B_exo1	83.5	2.10e-23	100.0%	69.8%

D2 high residues 838-998

PDB

Domain cluster: rep: IMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595139__D209-342

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	101.1	9.20e-29	93.2%	31.4%

D3 medium residues 29-157

PDB

Domain cluster: rep: DNA_polymerase__YP_784249__Nile_crocodilepox_virus__1285600__D2-148

D4 medium residues 352-433

PDB

Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_009162448__Salmon_gill_poxvirus__1680908__D388-474

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08408.17 best	DNA_pol_B_3	90.5	1.40e-25	100.0%	64.1%

D5 medium residues 475-518_613-670

PDB

Domain cluster: rep: DNA_polymerase__YP_008052566__Phaeocystis_globosa_virus__251749__D724-746_869-928

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	62.5	4.60e-17	56.9%	11.9%

D6 medium residues 530-554_694-827

PDB

Domain cluster: rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	89.4	3.40e-25	84.3%	17.7%
PF00136.27	DNA_pol_B	25.4	8.30e-06	20.8%	5.5%

D7 medium residues 555-612_671-693

PDB

Domain cluster: rep: putative_E9L_protein__YP_010085734__Orthopoxvirus_Abatino__2478919__D552-603_680-702

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	25.7	7.10e-06	74.1%	9.7%