DNA_polymerase

Euk-Vir

Lymantria_xylina_nucleopolyhedrovirus

DNA_polymerase__YP_003517819__Lymantria_xylina_nucleopolyhedrovirus__166921

Identity

80.8 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lymantria_xylina_nucleopolyhedrovirus

TaxID: 166921

View cluster (158 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 193-243_268-443

PDB

Domain cluster: rep: DNA_polymerase__YP_009118564__Condylorrhiza_vestigialis_MNPV__1592576__D196-404

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10108.16 best	DNA_pol_B_exo2	51.4	1.60e-13	94.3%	78.3%
PF03104.26	DNA_pol_B_exo1	68.0	1.20e-18	75.3%	73.1%

D2 high residues 554-563_657-766

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_009552191__Malacosoma_neustria_nucleopolyhedrovirus__38012__D557-567_668-765

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	46.8	2.70e-12	96.7%	23.0%

D3 medium residues 9-71_142-184

PDB

Domain cluster: rep: DNA_polymerase__YP_009666761__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D1-67_114-188

D4 medium residues 502-542_565-649

PDB

Domain cluster: rep: DNA_polymerase__YP_010086932__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D494-537_560-649

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	28.3	1.10e-06	68.2%	13.7%

D5 medium residues 786-833_885-969

PDB

Domain cluster: rep: hypothetical_protein_MIV120R__YP_654692__Invertebrate_iridescent_virus_3__345201__D821-880_935-1042