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DNA_polymerase

Euk-Vir

Choristoneura_rosaceana_entomopoxvirus_L

DNA_polymerase__YP_008004452__Choristoneura_rosaceana_entomopoxvirus_L__1293539

Identity

Accession:: YP_008004452 ↗
Protein ID:: DNA_polymerase
Kingdom:: euk

Quality

71.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Betaentomopoxvirus› Choristoneura_rosaceana_entomopoxvirus_'L'

TaxID: 1293539

Cluster

View cluster (158 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 241-414_525-580

PDB

Domain cluster: rep: DNA_polymerase__YP_009001699__Anomala_cuprea_entomopoxvirus__62099__D246-424_551-588

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08408.17 best	DNA_pol_B_3	33.0	9.00e-08	79.6%	31.2%
PF03104.26	DNA_pol_B_exo1	112.0	4.50e-32	77.4%	69.8%

D2 high residues 420-520

PDB

Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_009162448__Salmon_gill_poxvirus__1680908__D388-474

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08408.17 best	DNA_pol_B_3	49.0	1.00e-12	98.0%	53.1%

D3 medium residues 1-56

PDB

D4 medium residues 57-98_130-161

PDB

D5 medium residues 162-234

PDB

D6 medium residues 581-608_697-765

PDB

Domain cluster: rep: DNA_polymerase__YP_008052566__Phaeocystis_globosa_virus__251749__D724-746_869-928

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	23.8	2.60e-05	89.7%	13.9%

CATH (38)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2rp4A00	6.10.280.60	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain	0.79	47.0	5.48e-01	91.8%	81.7%
1yxrA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.79	50.0	5.68e-01	87.6%	83.8%
3nkzA00	1.20.58.380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit.	0.78	48.0	4.89e-01	70.1%	62.9%
4wzxA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.77	48.0	5.44e-01	83.5%	81.3%
4aifA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.74	47.0	4.04e-01	81.4%	43.1%
1nafA02	1.20.58.160	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	50.0	5.38e-01	87.6%	82.4%
3hiuD00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.70	50.0	4.27e-01	74.2%	79.6%
1fpoC02	1.20.1280.20	Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain	0.69	52.0	5.40e-01	92.8%	83.5%
2pusA04	6.10.140.300	Special › Helix non-globular › Helix Hairpins ›	0.66	37.0	3.56e-01	72.2%	48.1%
3mq1A01	1.20.58.970	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	52.0	5.40e-01	83.5%	90.2%
2wbiB03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.65	52.0	4.41e-01	85.6%	83.5%
1u89A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.65	54.0	4.79e-01	89.7%	79.1%
3gnlB02	1.10.287.1890	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	43.0	4.88e-01	86.6%	97.1%
2c5iT00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	49.0	5.03e-01	91.8%	85.1%
1qgtB00	1.10.4090.10	Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus	0.63	51.0	4.48e-01	86.6%	81.8%
1k90B03	1.20.140.60	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 ›	0.62	52.0	4.91e-01	93.8%	75.7%
3uumA00	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.61	49.0	4.53e-01	85.6%	72.1%
2lm9A00	1.20.58.970	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	53.0	5.36e-01	93.8%	95.8%
1t72A01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.60	49.0	4.60e-01	86.6%	71.8%
2i0mA02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.60	47.0	4.64e-01	85.6%	79.2%
1jmwA00	1.20.120.30	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain	0.60	49.0	4.33e-01	89.7%	62.3%
3ce2A01	1.20.140.70	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain	0.60	47.0	4.02e-01	92.8%	52.6%
3rc3A05	1.20.58.1080	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	41.0	3.90e-01	93.8%	60.2%
7csoA01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.59	51.0	3.87e-01	93.8%	49.1%
1t72A02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.59	45.0	4.58e-01	85.6%	81.6%
3pe0A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.59	49.0	4.86e-01	91.8%	85.1%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.59	42.0	4.39e-01	99.0%	84.7%
1vctA01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.58	49.0	4.71e-01	90.7%	81.7%
3nvoB02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.58	54.0	5.07e-01	99.0%	82.8%
1s35A02	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	47.0	4.53e-01	87.6%	76.4%
4x28C03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.58	46.0	4.05e-01	85.6%	92.3%
3lmfA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.57	41.0	4.00e-01	76.3%	94.5%
1uurA01	1.20.58.240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1	0.56	49.0	4.71e-01	92.8%	86.4%
1u5pA01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	48.0	4.66e-01	94.8%	83.3%
3chxC00	1.20.1050.50	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Particulate methane monooxygenase subunit c2. Chain: C	0.56	48.0	4.09e-01	93.8%	64.8%
3cegA00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.55	46.0	3.31e-01	91.8%	64.7%
3fb2A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.55	46.0	4.53e-01	90.7%	84.8%
3ck6C02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.54	47.0	4.41e-01	93.8%	76.5%

ECOD (53)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3250208	4207.1.2.1 ↗	alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7	0.77	53.0	4.73e-01	94.8%	52.3%
5041772	5069.1.3.0 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits	0.74	51.0	4.99e-01	71.1%	70.5%
4452394	4207.1.2.1 ↗	alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7	0.74	56.0	4.85e-01	92.8%	54.3%
4545639	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.74	55.0	4.98e-01	77.3%	63.2%
3697013	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.72	54.0	5.25e-01	85.6%	71.4%
3467440	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.70	51.0	3.84e-01	76.3%	59.6%
4645372	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.69	52.0	5.28e-01	77.3%	82.1%
3233670	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.68	56.0	4.83e-01	86.6%	66.9%
3516367	174.1.1.1 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin	0.67	57.0	5.07e-01	89.7%	88.9%
3183672	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.67	60.0	5.09e-01	94.8%	96.7%
5042408	632.22.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats	0.67	48.0	4.57e-01	73.2%	70.9%
4000281	192.20.1.0 ↗	alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD	0.66	51.0	5.09e-01	89.7%	78.0%
3743070	601.4.1.60 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TMD0_ABC	0.66	50.0	4.21e-01	79.4%	86.5%
4863092	150.3.1.28 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › GCSF	0.65	55.0	5.18e-01	88.7%	98.2%
3249849	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.65	53.0	5.05e-01	84.5%	75.5%
3221858	5001.1.1.45 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sra	0.64	59.0	4.00e-01	97.9%	72.6%
3919997	3615.1.1.0 ↗	alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain	0.64	54.0	5.03e-01	89.7%	91.7%
3817914	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.64	52.0	4.77e-01	86.6%	84.8%
3253283	192.5.1.14 ↗	alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA	0.64	52.0	5.32e-01	86.6%	87.4%
3721587	611.7.1.10 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Helo_like_N	0.63	57.0	4.38e-01	95.9%	72.7%
4883406	622.4.1.1 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5	0.63	52.0	4.88e-01	86.6%	73.3%
3441516	109.3.1.11 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5	0.63	58.0	3.93e-01	99.0%	46.2%
5008343	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.62	51.0	5.01e-01	86.6%	87.6%
5081683	2002.3.1.3 ↗	a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57	0.62	58.0	3.69e-01	100.0%	38.8%
4093008	192.29.1.157 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › MG280	0.61	50.0	3.89e-01	89.7%	94.1%
3795777	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.61	53.0	4.89e-01	94.8%	93.6%
4973584	604.3.1.51 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › 8xMP	0.61	44.0	4.64e-01	84.5%	83.0%
4459896	622.4.1.1 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5	0.61	51.0	4.81e-01	87.6%	74.6%
3474226	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.61	49.0	4.37e-01	86.6%	72.9%
3450966	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.61	56.0	4.68e-01	100.0%	90.3%
4983442	604.5.1.2 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU	0.61	47.0	4.78e-01	85.6%	83.2%
3269429	603.2.1.2 ↗	alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil	0.61	50.0	4.70e-01	85.6%	79.1%
3732651	5082.1.1.1 ↗	alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux	0.61	49.0	3.80e-01	86.6%	76.7%
4241645	632.22.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA	0.61	40.0	4.11e-01	75.3%	71.1%
3800506	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.60	49.0	4.62e-01	91.8%	73.0%
3787587	604.6.1.1 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT	0.60	47.0	4.72e-01	88.7%	81.0%
4945610	622.4.1.0 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related	0.60	49.0	4.89e-01	92.8%	88.0%
3327867	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.59	54.0	4.47e-01	100.0%	85.9%
3593945	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.59	46.0	3.61e-01	86.6%	39.0%
3522864	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.59	50.0	4.76e-01	88.7%	79.1%
3474685	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.58	48.0	4.55e-01	88.7%	74.8%
3327997	159.1.2.1 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH	0.58	43.0	4.12e-01	88.7%	67.0%
3212403	3877.1.1.1 ↗	alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP	0.58	46.0	3.34e-01	84.5%	51.4%
3291034	3271.1.1.1 ↗	alpha arrays › CdiA C-terminal nuclease domain › CdiA C-terminal nuclease domain › CdiA C-terminal nuclease domain › Ntox28	0.57	50.0	5.13e-01	92.8%	96.8%
4965518	3636.1.1.0 ↗	a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain	0.57	47.0	4.59e-01	100.0%	82.9%
4961908	101.1.6.0 ↗	alpha arrays › HTH › HTH › TrpR	0.56	39.0	4.25e-01	96.9%	88.7%
3564106	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.55	46.0	4.53e-01	94.8%	84.8%
4258212	603.2.1.12 ↗	alpha bundles › STAT-like › STAT › STAT › 7tm_7	0.53	47.0	3.40e-01	100.0%	74.8%
3920337	604.1.1.142 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SYNE1_2	0.53	41.0	3.96e-01	84.5%	74.8%
3785916	3559.1.1.40 ↗	a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31	0.53	44.0	4.24e-01	96.9%	80.9%
3739921	1015.1.1.1 ↗	alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › INSIG	0.51	42.0	3.38e-01	88.7%	63.2%
3580347	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.51	43.0	4.19e-01	93.8%	83.8%
4953831	140.1.1.5 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1	0.51	43.0	3.54e-01	94.8%	60.6%

D7 medium residues 609-656_767-802_823-844_891-901

PDB

Domain cluster: rep: DNA_polymerase__YP_006908614__Epinotia_aporema_granulovirus__166056__D535-604_654-717_762-775

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	33.1	3.90e-08	51.3%	13.2%
PF00136.27	DNA_pol_B	39.5	4.50e-10	42.7%	9.5%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gv9B04	3.90.1600.10	Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain	0.88	76.0	6.21e-01	89.7%	93.4%
1q8iA04	3.90.1600.10	Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain	0.76	73.0	5.82e-01	100.0%	71.8%
2dibA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	30.0	3.24e-01	72.6%	52.6%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3089539	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.91	86.0	6.17e-01	98.3%	98.3%
4891101	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.88	74.0	6.32e-01	86.3%	84.3%
5005286	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.87	84.0	5.93e-01	100.0%	88.5%
5019480	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.87	83.0	4.92e-01	100.0%	36.3%
3558196	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.86	82.0	5.94e-01	100.0%	83.9%
3993981	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.83	76.0	5.90e-01	94.9%	92.9%
4982660	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.76	72.0	5.72e-01	100.0%	91.6%
3365684	306.6.1.0 ↗	a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like	0.67	33.0	3.63e-01	72.6%	57.0%
3977525	2485.3.1.4 ↗	a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2	0.63	48.0	3.46e-01	80.3%	85.6%

D8 medium residues 973-1065

PDB