DNA_polymerase

Euk-Vir

Turkey_aviadenovirus_5

DNA_polymerase__YP_008719852__Turkey_aviadenovirus_5__1408258

Identity

78.7 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Aviadenovirus› turkey_adenovirus_5

TaxID: 1408258

View cluster (24 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-153

PDB

Domain cluster: rep: DNA_polymerase__YP_009246380__Bat_mastadenovirus_WIV10__1788432__D69-178

D2 medium residues 200-311_340-385

PDB

Domain cluster: rep: hypothetical_protein_CaV1gp07__NP_044189__Canine_mastadenovirus_A__10537__D45-121_189-230

D3 medium residues 312-339_386-439

PDB

Domain cluster: representative

D4 medium residues 440-575

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03175.19 best	DNA_pol_B_2	128.5	5.00e-37	99.3%	26.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4mycA01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.52	46.0	3.46e-01	97.1%	97.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4463772	2484.1.1.36 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2	0.81	69.0	5.40e-01	94.9%	45.7%

D5 medium residues 596-631_647-754

PDB

Domain cluster: rep: DNA_polymerase__NP_040516__Human_mastadenovirus_C__129951__D703-805

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03175.19 best	DNA_pol_B_2	107.8	9.30e-31	99.3%	31.2%

D6 medium residues 1098-1192

PDB

Domain cluster: rep: DNA_polymerase__YP_006383556__Goose_adenovirus_4__1193422__D1120-1209