DNA_polymerase

Euk-Vir

Pigeonpox_virus

DNA_polymerase__YP_009046328__Pigeonpox_virus__10264

Identity

83.5 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Pigeonpox_virus

TaxID: 10264

View cluster (158 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 161-328_431-460

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03104.26 best	DNA_pol_B_exo1	118.9	3.50e-34	88.4%	70.2%
PF08408.17	DNA_pol_B_3	52.4	8.90e-14	40.4%	31.2%

D2 high residues 330-419

PDB

Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_009162448__Salmon_gill_poxvirus__1680908__D388-474

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08408.17 best	DNA_pol_B_3	80.3	2.00e-22	95.6%	65.6%

D3 high residues 823-979

PDB

Domain cluster: rep: IMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595139__D209-342

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	89.5	3.00e-25	93.0%	31.1%

D4 medium residues 1-64_104-160

PDB

Domain cluster: rep: DNA_polymerase__YP_784249__Nile_crocodilepox_virus__1285600__D2-148

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08452.17 best	DNAP_B_exo_N	52.7	2.90e-14	18.2%	100.0%

D5 medium residues 65-83_542-674

PDB

Domain cluster: rep: DNA_polymerase__YP_008052566__Phaeocystis_globosa_virus__251749__D724-746_869-928

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	120.3	1.30e-34	94.1%	25.6%

D6 medium residues 512-541_675-822

PDB

Domain cluster: rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	121.0	8.30e-35	83.2%	27.8%
PF00136.27	DNA_pol_B	31.0	1.70e-07	18.5%	6.6%