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DNA_polymerase

Euk-Vir

Peridroma_alphabaculovirus

DNA_polymerase__YP_009049884__Peridroma_alphabaculovirus__1346829

Identity

Accession:
YP_009049884 ↗
Protein ID:
DNA_polymerase
Kingdom:
euk

Quality

84.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Peridroma_alphabaculovirus

TaxID: 1346829

Cluster

View cluster (158 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 190-438
PDB
Domain cluster: rep: DNA_polymerase__YP_009118564__Condylorrhiza_vestigialis_MNPV__1592576__D196-404
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF10108.16 best DNA_pol_B_exo2 28.7 1.40e-06 93.6% 80.7%
PF03104.26 DNA_pol_B_exo1 71.8 8.00e-20 76.3% 73.6%
D2 medium residues 1-70_115-189
PDB
Domain cluster: rep: DNA_polymerase__YP_009666761__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D1-67_114-188
D3 medium residues 439-497
PDB
Domain cluster: rep: DNA_polymerase__YP_009552625__Operophtera_brumata_nucleopolyhedrovirus__1046267__D407-471
D4 medium residues 498-545_568-665
PDB
Domain cluster: rep: DNA_polymerase__YP_010086932__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D494-537_560-649
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 34.7 1.30e-08 68.5% 12.8%
D5 medium residues 546-567_666-775
PDB
Domain cluster: rep: DNA_pol__YP_009011170__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D533-554_655-709_748-765
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 47.6 1.50e-12 83.3% 22.5%
D6 medium residues 776-825_913-967_1001-1037
PDB
Domain cluster: rep: dna-pol__YP_009666600__Oxyplax_ochracea_nucleopolyhedrovirus__2083176__D730-794_872-935
D7 medium residues 826-842_857-912
PDB
Domain cluster: rep: DNA_polymerase__YP_009513145__Agrotis_segetum_granulovirus__10464__D860-955