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DNA_polymerase

Euk-Vir

Pseudoplusia_includens_SNPV_IE

DNA_polymerase__YP_009116970__Pseudoplusia_includens_SNPV_IE__1592335

Identity

Accession:
YP_009116970 ↗
Protein ID:
DNA_polymerase
Kingdom:
euk

Quality

80.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Pseudoplusia_includens_SNPV_IE

TaxID: 1592335

Cluster

View cluster (158 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 188-278
PDB
Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_010088005__Lymphocystis_disease_virus_4__2704413__D159-241
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 45.3 1.10e-11 100.0% 39.3%
D2 medium residues 423-493_595-644
PDB
Domain cluster: rep: IMGVR_UViG_3300048031_000811-3300048031-Ga0494182_008429_2395_4416__D190-244_288-384
D3 medium residues 513-544_565-594_645-661
PDB
Domain cluster: rep: DNA_polymerase__YP_009316112__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D473-499_523-556
D4 medium residues 545-564_662-770
PDB
Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_009552191__Malacosoma_neustria_nucleopolyhedrovirus__38012__D557-567_668-765
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 47.7 1.50e-12 90.7% 22.5%
D5 medium residues 771-831_914-965_1009-1022_1043-1059
PDB
Domain cluster: rep: DNA_pol__YP_009011170__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D790-807_882-1000