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DNA_polymerase
Euk-VirTurkeypox_virus
DNA_polymerase__YP_009177089__Turkeypox_virus__336486
Identity
- Accession:
- YP_009177089 ↗
- Protein ID:
- DNA_polymerase
- Kingdom:
- euk
Quality
79.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Turkeypox_virus
TaxID: 336486
Cluster
View cluster (158 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 160-324
Domain cluster:
rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03104.26 best | DNA_pol_B_exo1 | 109.7 | 2.20e-31 | 100.0% | 68.2% |
D2
high
residues 330-418
Domain cluster:
rep: DNA_polymerase_elongation_subunit_family_B__YP_009162448__Salmon_gill_poxvirus__1680908__D388-474
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08408.17 best | DNA_pol_B_3 | 70.4 | 2.40e-19 | 95.5% | 64.8% |
D3
high
residues 808-979
Domain cluster:
rep: IMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595139__D209-342
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00136.27 best | DNA_pol_B | 106.6 | 1.90e-30 | 93.6% | 33.6% |
D4
medium
residues 2-152
D5
medium
residues 483-506_565-662
Domain cluster:
rep: DNA_polymerase__YP_008052566__Phaeocystis_globosa_virus__251749__D724-746_869-928
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00136.27 best | DNA_pol_B | 74.4 | 1.10e-20 | 84.4% | 18.1% |
D6
medium
residues 518-550_663-806
Domain cluster:
rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00136.27 best | DNA_pol_B | 120.1 | 1.50e-34 | 83.0% | 26.9% |
| PF00136.27 | DNA_pol_B | 38.0 | 1.30e-09 | 19.2% | 7.3% |