DNA_polymerase

Euk-Vir

Short-finned_eel_ranavirus

DNA_polymerase__YP_009259431__Short-finned_eel_ranavirus__638660

Identity

80.4 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Short-finned_eel_ranavirus

TaxID: 638660

View cluster (158 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-162

PDB

Domain cluster: rep: DNA_polymerase__YP_010084862__Shrimp_hemocyte_iridescent_virus__2039780__D2-200

D2 high residues 519-584

PDB

Domain cluster: rep: DNA_polymerase__YP_006347653__European_catfish_virus__84739__D519-584

D3 medium residues 166-253

PDB

Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_010088005__Lymphocystis_disease_virus_4__2704413__D159-241

D4 medium residues 389-432_601-664

PDB

Domain cluster: rep: DNA_polymerase__YP_008052566__Phaeocystis_globosa_virus__251749__D724-746_869-928

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	69.2	4.30e-19	77.8%	17.4%

D5 medium residues 460-514_665-778

PDB

Domain cluster: rep: DNA_polymerase__YP_010084862__Shrimp_hemocyte_iridescent_virus__2039780__D490-509_716-834

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	58.9	5.70e-16	68.6%	27.8%
PF00136.27	DNA_pol_B	44.3	1.60e-11	31.9%	9.0%

D6 medium residues 802-996

PDB