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DNA_polymerase

Euk-Vir

Spodoptera_eridania_nucleopolyhedrovirus

DNA_polymerase__YP_010087095__Spodoptera_eridania_nucleopolyhedrovirus__2315721

Identity

Accession:
YP_010087095 ↗
Protein ID:
DNA_polymerase
Kingdom:
euk

Quality

82.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Spodoptera_eridania_nucleopolyhedrovirus

TaxID: 2315721

Cluster

View cluster (158 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-77_122-197
PDB
Domain cluster: rep: DNA_polymerase__YP_009666761__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D1-67_114-188
D2 medium residues 198-290
PDB
Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_010088005__Lymphocystis_disease_virus_4__2704413__D159-241
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 32.3 9.40e-08 98.9% 36.4%
D3 medium residues 458-481_608-660
PDB
Domain cluster: rep: dna_polymerase__YP_009186754__Sucra_jujuba_nucleopolyhedrovirus__1563660__D604-615_630-695
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 34.6 1.30e-08 97.4% 12.1%
D4 medium residues 482-506_518-554_576-607_661-672
PDB
Domain cluster: representative
D5 medium residues 792-851_873-983_1024-1061
PDB
Domain cluster: rep: hypothetical_protein_MIV120R__YP_654692__Invertebrate_iridescent_virus_3__345201__D821-880_935-1042