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DNA_polymerase_processivity_factor
Euk-VirSea_otter_poxvirus
DNA_polymerase_processivity_factor__YP_009480649__Sea_otter_poxvirus__1416741
Identity
- Accession:
- YP_009480649 ↗
- Protein ID:
- DNA_polymerase_processivity_factor
- Kingdom:
- euk
Quality
89.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Mustelpoxvirus›
Sea_otter_poxvirus
TaxID: 1416741
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-216
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05941.20 best | Chordopox_A20R | 148.2 | 4.20e-43 | 100.0% | 46.1% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4glwA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.70 | 65.0 | 5.76e-01 | 98.7% | 97.3% |
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.69 | 64.0 | 6.16e-01 | 100.0% | 98.9% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 35.0 | 4.15e-01 | 94.3% | 96.3% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 26.0 | 3.55e-01 | 79.2% | 100.0% |
| 1kblA06 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 31.0 | 3.95e-01 | 81.8% | 99.0% |
| 3omzA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 27.0 | 3.25e-01 | 93.7% | 75.7% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 27.0 | 3.56e-01 | 82.4% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3986583 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.72 | 66.0 | 6.00e-01 | 100.0% | 94.8% |
| 5012458 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.70 | 65.0 | 5.63e-01 | 100.0% | 72.9% |
| 3387834 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.67 | 62.0 | 5.89e-01 | 100.0% | 98.9% |
| 2831771 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.66 | 61.0 | 5.81e-01 | 100.0% | 95.7% |
| 3593156 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.66 | 56.0 | 5.09e-01 | 91.2% | 99.1% |
| 4360726 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.61 | 57.0 | 4.58e-01 | 100.0% | 68.6% |
| 4411335 | 206.1.3.5 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_aden | 0.60 | 56.0 | 4.51e-01 | 100.0% | 72.0% |
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.59 | 23.0 | 3.80e-01 | 90.6% | 98.3% |
| 5023381 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 28.0 | 3.86e-01 | 84.9% | 100.0% |
| 161965 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.55 | 32.0 | 3.79e-01 | 93.1% | 83.8% |
| 3687458 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.55 | 27.0 | 3.72e-01 | 81.1% | 97.3% |
| 3924696 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.50 | 29.0 | 3.10e-01 | 97.5% | 62.1% |
D2
high
residues 221-304
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05941.20 best | Chordopox_A20R | 74.4 | 1.20e-20 | 100.0% | 25.3% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 58.0 | 6.21e-01 | 78.6% | 100.0% |
| 2wg5F02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 48.0 | 5.66e-01 | 79.8% | 100.0% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 51.0 | 4.64e-01 | 77.4% | 69.8% |
| 4fnfA00 | 2.40.50.50 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 52.0 | 4.94e-01 | 81.0% | 83.7% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 50.0 | 4.59e-01 | 79.8% | 77.2% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 47.0 | 5.19e-01 | 81.0% | 92.5% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 51.0 | 4.62e-01 | 81.0% | 78.4% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 49.0 | 5.06e-01 | 81.0% | 94.9% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 47.0 | 4.97e-01 | 77.4% | 92.0% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 50.0 | 5.31e-01 | 90.5% | 97.3% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 48.0 | 4.59e-01 | 81.0% | 83.5% |
| 3nqiA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.63 | 46.0 | 5.10e-01 | 97.6% | 100.0% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 47.0 | 4.43e-01 | 79.8% | 77.0% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 48.0 | 4.33e-01 | 83.3% | 67.2% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.61 | 46.0 | 4.83e-01 | 81.0% | 95.9% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 50.0 | 5.13e-01 | 92.9% | 93.9% |
| 1zxtA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 37.0 | 4.26e-01 | 98.8% | 85.2% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 36.0 | 4.00e-01 | 97.6% | 74.6% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 37.0 | 4.08e-01 | 96.4% | 77.3% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.60 | 47.0 | 5.00e-01 | 89.3% | 97.3% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 45.0 | 3.96e-01 | 81.0% | 57.4% |
| 3k0yA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.59 | 43.0 | 4.75e-01 | 92.9% | 100.0% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.59 | 46.0 | 4.94e-01 | 89.3% | 98.6% |
| 3iayA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 45.0 | 4.29e-01 | 82.1% | 88.8% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 36.0 | 4.00e-01 | 98.8% | 83.6% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 35.0 | 3.70e-01 | 97.6% | 72.6% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 35.0 | 4.10e-01 | 91.7% | 100.0% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 34.0 | 3.69e-01 | 97.6% | 84.8% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 42.0 | 3.99e-01 | 91.7% | 83.7% |
| 1stzA03 | 3.30.390.60 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Heat-inducible transcription repressor hrca homolog; domain 3 | 0.51 | 43.0 | 4.30e-01 | 92.9% | 89.9% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 29.0 | 3.20e-01 | 71.4% | 70.8% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.50 | 29.0 | 3.35e-01 | 71.4% | 80.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3517758 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.74 | 53.0 | 5.49e-01 | 81.0% | 78.8% |
| 3711866 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.72 | 53.0 | 4.89e-01 | 81.0% | 61.9% |
| 4970216 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.71 | 47.0 | 4.33e-01 | 79.8% | 52.7% |
| 4165766 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.70 | 48.0 | 5.51e-01 | 81.0% | 98.3% |
| 3268408 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.70 | 50.0 | 4.23e-01 | 81.0% | 46.7% |
| 5060754 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 52.0 | 4.76e-01 | 81.0% | 86.1% |
| 3230020 | 2.1.1.235 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26704 | 0.69 | 51.0 | 5.49e-01 | 77.4% | 94.3% |
| 4343591 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.68 | 51.0 | 4.70e-01 | 81.0% | 62.9% |
| 3964458 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 50.0 | 4.94e-01 | 78.6% | 82.2% |
| 4361731 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.67 | 49.0 | 5.45e-01 | 83.3% | 100.0% |
| 3226474 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.66 | 49.0 | 5.22e-01 | 78.6% | 89.3% |
| 4024623 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.66 | 51.0 | 5.26e-01 | 82.1% | 86.3% |
| 4185603 | 2.1.1.63 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_2 | 0.66 | 46.0 | 4.97e-01 | 76.2% | 87.1% |
| 4552597 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.66 | 51.0 | 5.14e-01 | 82.1% | 82.1% |
| 4103220 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.66 | 50.0 | 5.29e-01 | 83.3% | 90.7% |
| 4490344 | 2.1.1.271 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26390 | 0.65 | 51.0 | 4.80e-01 | 85.7% | 81.9% |
| 4024439 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.65 | 46.0 | 4.95e-01 | 77.4% | 90.0% |
| 4347147 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.65 | 50.0 | 5.11e-01 | 83.3% | 93.8% |
| 3235466 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 4.92e-01 | 81.0% | 90.0% |
| 3938425 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 47.0 | 4.58e-01 | 78.6% | 69.5% |
| 4097993 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.64 | 43.0 | 4.92e-01 | 77.4% | 100.0% |
| 4988607 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 48.0 | 4.19e-01 | 81.0% | 84.6% |
| 5005288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 47.0 | 3.94e-01 | 81.0% | 56.8% |
| 4100241 | 2.1.1.113 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_2nd | 0.63 | 45.0 | 4.54e-01 | 78.6% | 74.1% |
| 4653384 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.63 | 43.0 | 4.83e-01 | 77.4% | 100.0% |
| 146269 | 2.18.1.0 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins | 0.62 | 46.0 | 5.08e-01 | 97.6% | 100.0% |
| 4952176 | 2.18.1.0 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins | 0.62 | 49.0 | 5.21e-01 | 89.3% | 96.0% |
| 3239136 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 49.0 | 4.58e-01 | 85.7% | 93.3% |
| 3215090 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 44.0 | 4.77e-01 | 78.6% | 98.5% |
| 5028838 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 45.0 | 4.58e-01 | 81.0% | 98.8% |
| 665 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.61 | 37.0 | 4.06e-01 | 94.0% | 76.1% |
| 1175458 | 2.18.1.1 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N | 0.60 | 47.0 | 5.00e-01 | 89.3% | 97.3% |
| 3784540 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.59 | 45.0 | 4.14e-01 | 81.0% | 73.6% |
| 4379699 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 41.0 | 4.53e-01 | 77.4% | 95.4% |
| 4183857 | 325.1.7.30 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 | 0.58 | 37.0 | 3.89e-01 | 85.7% | 72.0% |
| 3880422 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.58 | 37.0 | 4.02e-01 | 100.0% | 79.4% |
| 1297326 | 2.18.1.1 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N | 0.58 | 47.0 | 4.89e-01 | 92.9% | 97.4% |
| 5049556 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 42.0 | 3.83e-01 | 81.0% | 75.0% |
| 3165403 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.56 | 37.0 | 4.09e-01 | 76.2% | 89.2% |
| 3836558 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 40.0 | 4.46e-01 | 88.1% | 100.0% |
| 3408871 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.55 | 41.0 | 4.20e-01 | 81.0% | 86.3% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 35.0 | 3.72e-01 | 76.2% | 76.0% |
| 4193896 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.52 | 42.0 | 4.09e-01 | 89.3% | 81.1% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 35.0 | 3.64e-01 | 76.2% | 78.7% |
| 4025575 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 3.74e-01 | 92.9% | 86.9% |
| 4379144 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.51 | 43.0 | 4.14e-01 | 96.4% | 82.1% |
| 4040298 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 40.0 | 4.13e-01 | 95.2% | 90.0% |
| 2712015 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.51 | 32.0 | 3.27e-01 | 98.8% | 64.2% |
| 3704939 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 34.0 | 3.34e-01 | 83.3% | 63.3% |
| 4058734 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.51 | 41.0 | 3.98e-01 | 90.5% | 81.1% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 34.0 | 3.20e-01 | 76.2% | 54.1% |
| 4066174 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.50 | 41.0 | 3.90e-01 | 92.9% | 78.1% |
D3
high
residues 314-427
D4
medium
residues 1-53
Domain cluster:
rep: DNA_polymerase_processivity_factor__YP_009268831__Pteropox_virus__1873698__D4-41
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05941.20 best | Chordopox_A20R | 71.2 | 1.10e-19 | 100.0% | 15.5% |