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DNA_polymerase_processivity_subunit
Euk-VirSpheniscid_alphaherpesvirus_1
DNA_polymerase_processivity_subunit__YP_009342361__Spheniscid_alphaherpesvirus_1__2560777
Identity
- Accession:
- YP_009342361 ↗
- Protein ID:
- DNA_polymerase_processivity_subunit
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Spheniscid_alphaherpesvirus_1
TaxID: 2560777
Cluster
View cluster (51 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-149
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02282.22 best | Herpes_UL42 | 70.4 | 2.20e-19 | 99.2% | 79.9% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.88 | 85.0 | 6.41e-01 | 100.0% | 48.3% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.78 | 73.0 | 5.43e-01 | 100.0% | 46.6% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.76 | 70.0 | 5.31e-01 | 100.0% | 44.3% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.76 | 62.0 | 4.99e-01 | 100.0% | 46.1% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.75 | 65.0 | 5.12e-01 | 100.0% | 46.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 59.0 | 4.74e-01 | 100.0% | 45.0% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 61.0 | 4.92e-01 | 100.0% | 47.5% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 63.0 | 4.99e-01 | 100.0% | 47.0% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.73 | 30.0 | 4.36e-01 | 100.0% | 83.1% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 61.0 | 4.90e-01 | 100.0% | 46.9% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 59.0 | 4.76e-01 | 100.0% | 45.5% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 62.0 | 4.91e-01 | 100.0% | 45.7% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.73 | 62.0 | 6.33e-01 | 100.0% | 94.4% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.72 | 28.0 | 4.49e-01 | 97.7% | 95.8% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.72 | 29.0 | 4.18e-01 | 100.0% | 80.0% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 58.0 | 5.88e-01 | 100.0% | 91.4% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.68 | 62.0 | 4.84e-01 | 100.0% | 49.1% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.67 | 53.0 | 4.65e-01 | 100.0% | 56.5% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.66 | 52.0 | 5.56e-01 | 100.0% | 97.3% |
| 6obtA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.62 | 45.0 | 3.51e-01 | 100.0% | 36.2% |
| 5o16B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.61 | 45.0 | 3.54e-01 | 100.0% | 36.8% |
| 3kg8A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 44.0 | 4.45e-01 | 100.0% | 77.7% |
| 7wvzA03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 40.0 | 3.19e-01 | 100.0% | 38.1% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 31.0 | 3.44e-01 | 100.0% | 72.8% |
| 1wpuA00 | 3.40.1510.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hut operon positive regulatory protein HutP › Hut operon regulatory protein HutP | 0.51 | 41.0 | 3.93e-01 | 100.0% | 74.1% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.69e-01 | 100.0% | 66.9% |
| 2rgqB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 37.0 | 3.68e-01 | 100.0% | 72.9% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4891104 | 227.1.1.5 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_UL42 | 0.88 | 81.0 | 8.05e-01 | 100.0% | 93.9% |
| 3597091 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.77 | 64.0 | 6.56e-01 | 100.0% | 91.1% |
| 5023031 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 64.0 | 6.48e-01 | 100.0% | 91.2% |
| 143269 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 62.0 | 6.38e-01 | 100.0% | 89.6% |
| 3397928 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.76 | 65.0 | 6.64e-01 | 100.0% | 95.2% |
| 4987602 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.75 | 62.0 | 6.37e-01 | 100.0% | 90.4% |
| 4937819 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.75 | 63.0 | 6.39e-01 | 100.0% | 91.2% |
| 4941928 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.75 | 61.0 | 6.37e-01 | 100.0% | 93.3% |
| 4943404 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.75 | 64.0 | 6.42e-01 | 100.0% | 90.0% |
| 3624708 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.74 | 63.0 | 6.28e-01 | 100.0% | 86.7% |
| 5047575 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 61.0 | 6.27e-01 | 100.0% | 90.4% |
| 5044014 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 60.0 | 6.37e-01 | 100.0% | 96.5% |
| 3804177 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.74 | 69.0 | 6.62e-01 | 100.0% | 94.5% |
| 4178829 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 60.0 | 6.17e-01 | 100.0% | 88.8% |
| 3478975 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.74 | 64.0 | 6.36e-01 | 100.0% | 88.1% |
| 2392830 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 61.0 | 6.16e-01 | 100.0% | 86.3% |
| 4057537 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 60.0 | 6.17e-01 | 100.0% | 89.6% |
| 5033948 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.74 | 61.0 | 6.09e-01 | 100.0% | 86.2% |
| 1822927 | 227.1.1.2 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.74 | 63.0 | 5.79e-01 | 100.0% | 71.8% |
| 4142781 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 61.0 | 6.20e-01 | 100.0% | 90.4% |
| 5991 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.74 | 60.0 | 6.19e-01 | 100.0% | 91.0% |
| 3230925 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.74 | 63.0 | 6.32e-01 | 100.0% | 90.0% |
| 3788095 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.74 | 64.0 | 6.32e-01 | 100.0% | 88.9% |
| 4660283 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.73 | 61.0 | 6.27e-01 | 100.0% | 92.0% |
| 4172290 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.73 | 62.0 | 6.22e-01 | 100.0% | 89.2% |
| 5039027 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.73 | 59.0 | 6.17e-01 | 100.0% | 92.5% |
| 3238130 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.73 | 65.0 | 6.30e-01 | 100.0% | 86.2% |
| 4870150 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.73 | 62.0 | 6.14e-01 | 100.0% | 87.3% |
| 167574 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.73 | 59.0 | 5.95e-01 | 100.0% | 85.5% |
| 3499841 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.73 | 33.0 | 3.89e-01 | 83.7% | 61.1% |
| 4936050 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.73 | 61.0 | 6.18e-01 | 100.0% | 91.2% |
| 4517015 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.72 | 60.0 | 6.11e-01 | 100.0% | 91.1% |
| 4096140 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.72 | 61.0 | 6.20e-01 | 100.0% | 92.8% |
| 5074320 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 64.0 | 6.43e-01 | 100.0% | 93.8% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 62.0 | 6.19e-01 | 100.0% | 90.8% |
| 4456195 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 58.0 | 6.05e-01 | 100.0% | 93.3% |
| 5010672 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 59.0 | 6.09e-01 | 100.0% | 94.2% |
| 3602548 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.71 | 59.0 | 6.04e-01 | 100.0% | 91.2% |
| 3719143 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.71 | 62.0 | 6.18e-01 | 100.0% | 89.6% |
| 5051689 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.71 | 59.0 | 6.05e-01 | 100.0% | 91.2% |
| 4948360 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.71 | 58.0 | 5.90e-01 | 100.0% | 86.8% |
| 4026073 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.71 | 62.0 | 6.33e-01 | 100.0% | 96.8% |
| 5027067 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.71 | 59.0 | 6.13e-01 | 100.0% | 95.8% |
| 5011281 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.71 | 58.0 | 5.91e-01 | 100.0% | 89.6% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.71 | 56.0 | 5.74e-01 | 100.0% | 86.4% |
| 309454 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.71 | 58.0 | 5.82e-01 | 100.0% | 85.6% |
| 4983063 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.71 | 59.0 | 6.04e-01 | 100.0% | 92.8% |
| 5043507 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.70 | 59.0 | 6.09e-01 | 100.0% | 95.8% |
| 4998584 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.70 | 62.0 | 6.17e-01 | 100.0% | 91.1% |
| 4232371 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.70 | 58.0 | 6.00e-01 | 100.0% | 94.2% |
| 5039218 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.70 | 62.0 | 6.21e-01 | 100.0% | 93.8% |
| 4043935 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.69 | 60.0 | 6.07e-01 | 100.0% | 93.1% |
| 4038410 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.69 | 64.0 | 6.25e-01 | 100.0% | 93.6% |
| 4026069 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.67 | 58.0 | 5.72e-01 | 100.0% | 88.1% |
| 3292092 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.67 | 59.0 | 5.83e-01 | 100.0% | 90.3% |
| 3301984 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 29.0 | 4.43e-01 | 98.4% | 100.0% |
| 3960833 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.59 | 37.0 | 4.34e-01 | 87.6% | 94.1% |
| 5025341 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.58 | 35.0 | 3.87e-01 | 96.1% | 76.0% |
| 4640527 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.58 | 37.0 | 3.83e-01 | 82.2% | 67.2% |
| 3819014 | 243.3.1.47 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7074 | 0.57 | 31.0 | 3.66e-01 | 79.8% | 77.4% |
| 3283095 | 4321.1.1.0 ↗ | a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region | 0.57 | 40.0 | 3.43e-01 | 100.0% | 46.1% |
| 4547088 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.55 | 42.0 | 4.50e-01 | 100.0% | 94.5% |
| 3965319 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 37.0 | 3.89e-01 | 82.2% | 75.7% |
| 4268775 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 36.0 | 3.71e-01 | 82.2% | 71.2% |
| 4579550 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 35.0 | 3.56e-01 | 82.2% | 67.7% |
| 4124320 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 35.0 | 3.56e-01 | 82.2% | 67.7% |
| 4117325 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 35.0 | 3.54e-01 | 82.2% | 66.9% |
| 4393122 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 35.0 | 3.59e-01 | 82.2% | 69.6% |
| 4269457 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 36.0 | 3.55e-01 | 82.2% | 67.2% |
| 4063720 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.52 | 38.0 | 3.06e-01 | 76.7% | 95.3% |
| 3183463 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.52 | 32.0 | 3.44e-01 | 79.8% | 71.8% |
| 5066760 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.51 | 35.0 | 3.61e-01 | 82.9% | 72.6% |
D2
high
residues 165-239_251-330
Domain cluster:
rep: DNA_polymerase_processivity_subunit__YP_009054921__Equid_alphaherpesvirus_3__80341__D193-340
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.86 | 65.0 | 5.26e-01 | 92.9% | 44.9% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 59.0 | 6.49e-01 | 92.3% | 93.8% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.78 | 57.0 | 4.84e-01 | 92.3% | 48.7% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 65.0 | 5.12e-01 | 92.9% | 46.0% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.76 | 53.0 | 4.90e-01 | 92.3% | 57.5% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 54.0 | 4.96e-01 | 92.3% | 58.3% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 52.0 | 4.53e-01 | 93.5% | 49.1% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.70 | 52.0 | 5.75e-01 | 93.5% | 95.2% |
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.66 | 19.0 | 2.61e-01 | 89.0% | 45.8% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 61.0 | 5.07e-01 | 100.0% | 96.5% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.64 | 60.0 | 5.02e-01 | 100.0% | 98.0% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 60.0 | 5.03e-01 | 100.0% | 97.6% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 59.0 | 5.02e-01 | 100.0% | 96.7% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 59.0 | 5.00e-01 | 100.0% | 97.9% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 59.0 | 4.96e-01 | 100.0% | 96.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.62 | 58.0 | 4.86e-01 | 100.0% | 98.8% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 22.0 | 3.45e-01 | 92.3% | 81.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.62 | 58.0 | 4.93e-01 | 100.0% | 98.3% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 24.0 | 3.02e-01 | 92.9% | 63.4% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 4.08e-01 | 85.2% | 82.4% |
| 3kg8A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 36.0 | 3.94e-01 | 96.1% | 83.8% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.52 | 32.0 | 3.17e-01 | 96.8% | 55.6% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 71028 | 227.1.1.5 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_UL42 | 0.83 | 65.0 | 7.09e-01 | 92.3% | 94.7% |
| 4948360 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.81 | 58.0 | 6.35e-01 | 91.0% | 88.4% |
| 4991675 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 59.0 | 6.61e-01 | 92.9% | 94.4% |
| 4998585 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 58.0 | 6.50e-01 | 92.3% | 95.0% |
| 4941929 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 59.0 | 6.53e-01 | 92.9% | 92.2% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 56.0 | 6.24e-01 | 92.3% | 88.8% |
| 4936050 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 59.0 | 6.55e-01 | 92.3% | 93.6% |
| 4456195 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 58.0 | 6.62e-01 | 92.9% | 96.7% |
| 4646871 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 59.0 | 6.52e-01 | 92.3% | 93.6% |
| 3997015 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.80 | 59.0 | 6.46e-01 | 90.3% | 90.8% |
| 4976500 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 59.0 | 6.48e-01 | 92.9% | 92.2% |
| 5027067 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 58.0 | 6.56e-01 | 90.3% | 96.7% |
| 138072 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 60.0 | 6.54e-01 | 92.9% | 92.4% |
| 5029787 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 57.0 | 6.43e-01 | 92.9% | 95.0% |
| 309454 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.79 | 58.0 | 6.30e-01 | 92.3% | 88.6% |
| 5000468 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 60.0 | 6.66e-01 | 92.3% | 96.8% |
| 5037314 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.79 | 57.0 | 6.39e-01 | 90.3% | 95.0% |
| 4992059 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 58.0 | 6.50e-01 | 92.9% | 95.9% |
| 5991 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 57.0 | 6.43e-01 | 92.9% | 95.1% |
| 5011281 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 57.0 | 6.35e-01 | 92.3% | 92.8% |
| 4934002 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 58.0 | 6.31e-01 | 92.9% | 90.8% |
| 1290662 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 59.0 | 6.21e-01 | 92.3% | 84.6% |
| 4232371 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.78 | 57.0 | 6.48e-01 | 92.3% | 97.5% |
| 4983064 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 58.0 | 6.45e-01 | 92.9% | 95.2% |
| 4929645 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 58.0 | 6.45e-01 | 92.9% | 95.2% |
| 4660283 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.78 | 58.0 | 6.45e-01 | 92.9% | 95.2% |
| 5037345 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 60.0 | 6.45e-01 | 92.9% | 92.5% |
| 4943405 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 57.0 | 6.36e-01 | 92.3% | 94.4% |
| 3478160 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.77 | 59.0 | 6.43e-01 | 91.6% | 94.5% |
| 5051689 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 58.0 | 6.39e-01 | 93.5% | 95.2% |
| 5028024 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 57.0 | 6.23e-01 | 92.9% | 90.8% |
| 3292092 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 60.0 | 6.50e-01 | 92.9% | 94.0% |
| 5039027 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.77 | 56.0 | 6.31e-01 | 92.9% | 96.7% |
| 4057937 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.76 | 59.0 | 6.38e-01 | 93.5% | 92.5% |
| 4956740 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.76 | 57.0 | 6.31e-01 | 92.3% | 95.2% |
| 5043507 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.76 | 56.0 | 6.26e-01 | 90.3% | 96.7% |
| 3387590 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.76 | 52.0 | 5.90e-01 | 92.9% | 93.0% |
| 4212381 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.76 | 57.0 | 6.14e-01 | 92.9% | 89.6% |
| 3397928 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.75 | 59.0 | 6.51e-01 | 94.2% | 100.0% |
| 3230926 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.75 | 58.0 | 6.32e-01 | 98.1% | 95.4% |
| 3934036 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.75 | 56.0 | 6.36e-01 | 91.6% | 100.0% |
| 3256903 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.75 | 58.0 | 6.25e-01 | 92.9% | 92.6% |
| 5037344 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.75 | 56.0 | 6.29e-01 | 96.1% | 100.0% |
| 2834340 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.75 | 62.0 | 6.60e-01 | 98.1% | 97.1% |
| 3238130 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.73 | 60.0 | 6.20e-01 | 96.1% | 91.7% |
| 3478161 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.72 | 61.0 | 6.48e-01 | 98.1% | 100.0% |
| 3623607 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.72 | 60.0 | 6.35e-01 | 98.1% | 96.4% |
| 2325189 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.72 | 56.0 | 5.90e-01 | 92.9% | 90.5% |
| 3798354 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 57.0 | 6.14e-01 | 92.3% | 94.8% |
| 3939755 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 61.0 | 6.23e-01 | 98.1% | 92.6% |
| 4030418 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.72 | 58.0 | 6.08e-01 | 91.0% | 92.1% |
| 3223650 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.70 | 58.0 | 5.99e-01 | 92.9% | 91.7% |
| 3503503 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.68 | 61.0 | 6.31e-01 | 98.1% | 100.0% |
| 3346536 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.68 | 57.0 | 5.87e-01 | 98.1% | 93.8% |
| 3534499 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.68 | 60.0 | 6.20e-01 | 98.1% | 99.3% |
| 3743107 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.67 | 57.0 | 5.95e-01 | 96.1% | 98.6% |
| 3256387 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.64 | 58.0 | 5.86e-01 | 96.1% | 98.1% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.58 | 25.0 | 3.38e-01 | 79.4% | 75.0% |
| 4537756 | 330.1.1.25 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26980 | 0.58 | 21.0 | 2.87e-01 | 83.9% | 60.0% |
| 3592741 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 24.0 | 3.15e-01 | 86.5% | 68.2% |
| 820 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 38.0 | 4.08e-01 | 85.2% | 82.4% |
| 4464657 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 25.0 | 3.46e-01 | 89.0% | 85.0% |
| 3916383 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.53 | 39.0 | 3.93e-01 | 100.0% | 76.1% |
D3
high
residues 366-423
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.94 | 88.0 | 6.53e-01 | 100.0% | 45.7% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.93 | 87.0 | 6.96e-01 | 100.0% | 62.1% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.92 | 77.0 | 5.90e-01 | 100.0% | 43.6% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 83.0 | 8.09e-01 | 96.6% | 96.8% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.91 | 84.0 | 6.69e-01 | 100.0% | 61.7% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.89 | 76.0 | 5.82e-01 | 100.0% | 43.5% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.88 | 80.0 | 7.61e-01 | 100.0% | 92.5% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 80.0 | 6.55e-01 | 100.0% | 66.7% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.87 | 79.0 | 6.56e-01 | 100.0% | 63.3% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.87 | 81.0 | 6.68e-01 | 100.0% | 79.2% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 77.0 | 6.61e-01 | 100.0% | 67.8% |
| 4im0A04 | 1.20.1270.420 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.85 | 78.0 | 5.03e-01 | 100.0% | 24.4% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.85 | 70.0 | 6.49e-01 | 100.0% | 71.8% |
| 1jkvA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 77.0 | 5.20e-01 | 100.0% | 75.6% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 72.0 | 6.16e-01 | 100.0% | 60.4% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 69.0 | 4.98e-01 | 100.0% | 33.3% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.84 | 67.0 | 6.28e-01 | 93.1% | 71.4% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.83 | 63.0 | 5.89e-01 | 98.3% | 66.2% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.82 | 74.0 | 6.36e-01 | 100.0% | 74.4% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.82 | 72.0 | 6.78e-01 | 100.0% | 81.7% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.82 | 72.0 | 6.02e-01 | 100.0% | 61.4% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.81 | 71.0 | 5.33e-01 | 100.0% | 48.3% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.81 | 61.0 | 6.49e-01 | 81.0% | 97.9% |
| 2btqB03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 62.0 | 6.46e-01 | 81.0% | 100.0% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 70.0 | 6.35e-01 | 100.0% | 73.1% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 67.0 | 6.73e-01 | 100.0% | 93.1% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 70.0 | 6.06e-01 | 100.0% | 64.8% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.80 | 60.0 | 5.78e-01 | 86.2% | 70.1% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.80 | 70.0 | 5.97e-01 | 98.3% | 61.3% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.80 | 70.0 | 6.04e-01 | 98.3% | 67.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 64.0 | 5.31e-01 | 87.9% | 60.4% |
| 2hepA00 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 55.0 | 6.21e-01 | 100.0% | 100.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.79 | 66.0 | 5.88e-01 | 100.0% | 64.7% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.79 | 69.0 | 6.13e-01 | 98.3% | 100.0% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.79 | 66.0 | 6.25e-01 | 94.8% | 100.0% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 68.0 | 5.77e-01 | 100.0% | 60.2% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.78 | 67.0 | 5.40e-01 | 100.0% | 50.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 66.0 | 5.69e-01 | 100.0% | 58.8% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 66.0 | 6.67e-01 | 98.3% | 100.0% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 67.0 | 6.43e-01 | 100.0% | 88.1% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.77 | 68.0 | 5.37e-01 | 100.0% | 48.4% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 66.0 | 5.65e-01 | 100.0% | 61.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 64.0 | 6.22e-01 | 100.0% | 84.8% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 65.0 | 5.67e-01 | 100.0% | 64.1% |
| 2b7mA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.74 | 64.0 | 3.72e-01 | 100.0% | 11.3% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.72 | 62.0 | 4.97e-01 | 100.0% | 61.7% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 58.0 | 5.47e-01 | 100.0% | 77.3% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.70 | 57.0 | 5.06e-01 | 91.4% | 94.1% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 60.0 | 5.52e-01 | 98.3% | 77.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.67 | 57.0 | 5.09e-01 | 100.0% | 70.6% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.65 | 52.0 | 4.99e-01 | 100.0% | 75.7% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.64 | 45.0 | 4.08e-01 | 84.5% | 51.8% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 55.0 | 4.12e-01 | 94.8% | 41.5% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.64 | 53.0 | 4.28e-01 | 98.3% | 73.2% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 52.0 | 4.48e-01 | 100.0% | 57.5% |
| 4wr4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 52.0 | 4.45e-01 | 100.0% | 57.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3554931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.97 | 82.0 | 8.52e-01 | 100.0% | 94.4% |
| 3271912 | 5033.1.1.0 ↗ | extended segments › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM | 0.96 | 91.0 | 7.50e-01 | 100.0% | 61.1% |
| 3401214 | 3755.3.1.345 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Hobbit | 0.93 | 86.0 | 6.22e-01 | 100.0% | 43.4% |
| 4387171 | 603.5.1.18 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › Med30 | 0.93 | 82.0 | 5.82e-01 | 100.0% | 35.5% |
| 5035107 | 3922.1.1.358 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF26119 | 0.92 | 85.0 | 6.64e-01 | 100.0% | 53.5% |
| 2081106 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.92 | 85.0 | 7.24e-01 | 100.0% | 70.8% |
| 3592927 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.92 | 85.0 | 6.05e-01 | 100.0% | 41.9% |
| 3710098 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.91 | 84.0 | 6.37e-01 | 100.0% | 46.4% |
| 3960783 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.91 | 84.0 | 7.46e-01 | 100.0% | 72.5% |
| 4175684 | 3291.1.1.232 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Paralemmin | 0.91 | 83.0 | 6.26e-01 | 100.0% | 45.4% |
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.91 | 84.0 | 6.97e-01 | 100.0% | 61.1% |
| 3390898 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.91 | 83.0 | 6.82e-01 | 100.0% | 59.0% |
| 4954843 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.90 | 79.0 | 6.58e-01 | 94.8% | 61.1% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.90 | 83.0 | 7.55e-01 | 100.0% | 77.3% |
| 3884327 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.90 | 81.0 | 6.91e-01 | 98.3% | 66.7% |
| 5027487 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.89 | 82.0 | 5.38e-01 | 100.0% | 26.4% |
| 5039785 | 632.22.1.200 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF26119 | 0.89 | 82.0 | 6.88e-01 | 100.0% | 66.0% |
| 3672309 | 601.19.1.29 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › CA109-like | 0.89 | 82.0 | 5.67e-01 | 100.0% | 33.9% |
| 3397081 | 603.2.1.1 ↗ | alpha bundles › STAT-like › STAT › STAT › STAT_alpha | 0.88 | 81.0 | 5.78e-01 | 100.0% | 37.4% |
| 3487704 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 80.0 | 6.29e-01 | 100.0% | 50.4% |
| 3738678 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.88 | 78.0 | 5.99e-01 | 98.3% | 45.6% |
| 3465357 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.87 | 79.0 | 6.24e-01 | 100.0% | 53.0% |
| 3520611 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.87 | 79.0 | 5.43e-01 | 100.0% | 43.2% |
| 3949790 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.87 | 79.0 | 6.53e-01 | 100.0% | 86.0% |
| 2142296 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.87 | 75.0 | 6.24e-01 | 94.8% | 63.3% |
| 3963155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.87 | 77.0 | 6.96e-01 | 94.8% | 80.0% |
| 4983442 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.86 | 78.0 | 6.49e-01 | 98.3% | 62.1% |
| 3235297 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 78.0 | 5.38e-01 | 100.0% | 31.9% |
| 4167714 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.86 | 68.0 | 4.27e-01 | 84.5% | 28.1% |
| 3927737 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.85 | 77.0 | 6.47e-01 | 100.0% | 62.1% |
| 3377936 | 3922.1.1.173 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF3493 | 0.85 | 75.0 | 6.54e-01 | 100.0% | 65.9% |
| 4994040 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.84 | 75.0 | 6.24e-01 | 100.0% | 62.0% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.84 | 76.0 | 4.94e-01 | 100.0% | 24.2% |
| 3596490 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.83 | 73.0 | 6.35e-01 | 100.0% | 64.4% |
| 3523903 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.83 | 71.0 | 6.42e-01 | 96.6% | 70.0% |
| 3611163 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.83 | 73.0 | 4.30e-01 | 100.0% | 14.8% |
| 4028619 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.83 | 76.0 | 6.34e-01 | 100.0% | 61.1% |
| 2555592 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.82 | 74.0 | 6.49e-01 | 100.0% | 74.1% |
| 5007978 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.82 | 73.0 | 5.54e-01 | 100.0% | 43.0% |
| 3231463 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.82 | 72.0 | 6.12e-01 | 100.0% | 66.3% |
| 4076285 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.81 | 72.0 | 5.41e-01 | 100.0% | 94.3% |
| 3956906 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.81 | 71.0 | 6.58e-01 | 100.0% | 78.7% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.81 | 72.0 | 5.52e-01 | 100.0% | 60.8% |
| 3416168 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.81 | 70.0 | 4.73e-01 | 100.0% | 26.8% |
| 3971002 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.80 | 69.0 | 6.40e-01 | 98.3% | 77.3% |
| 3974625 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.79 | 68.0 | 6.45e-01 | 96.6% | 100.0% |
| 3694629 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.78 | 66.0 | 6.07e-01 | 100.0% | 73.8% |
| 3297770 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.77 | 65.0 | 5.86e-01 | 100.0% | 69.4% |
| 3993997 | 604.1.1.139 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF7799 | 0.77 | 67.0 | 5.32e-01 | 100.0% | 48.3% |
| 3668937 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.77 | 66.0 | 4.17e-01 | 100.0% | 19.7% |
| 4946275 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.76 | 65.0 | 4.27e-01 | 100.0% | 22.7% |
| 3704 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.76 | 64.0 | 6.10e-01 | 100.0% | 81.9% |
| 3972236 | 3755.3.1.42 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CheZ | 0.75 | 64.0 | 4.62e-01 | 100.0% | 32.8% |
| 3332952 | 192.8.1.265 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CASP_dom | 0.74 | 66.0 | 6.41e-01 | 100.0% | 89.2% |
| 3530780 | 310.2.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › MIX23 | 0.74 | 63.0 | 4.94e-01 | 100.0% | 45.4% |
| 3569033 | 3538.1.1.8 ↗ | extended segments › MerF › MerF › MerF › PF28754 | 0.73 | 62.0 | 6.34e-01 | 100.0% | 100.0% |
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.73 | 62.0 | 4.90e-01 | 100.0% | 45.4% |
| 3739924 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.73 | 62.0 | 5.08e-01 | 100.0% | 52.4% |
| 3879791 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.69 | 63.0 | 4.16e-01 | 100.0% | 28.9% |
| 4397665 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.69 | 58.0 | 4.98e-01 | 100.0% | 58.0% |