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DNA_replication_origin-binding_helicase
Euk-VirCercopithecine_alphaherpesvirus_2
DNA_replication_origin-binding_helicase__YP_164451__Cercopithecine_alphaherpesvirus_2__10317
Identity
- Accession:
- YP_164451 ↗
- Protein ID:
- DNA_replication_origin-binding_helicase
- Kingdom:
- euk
Quality
78.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Cercopithecine_alphaherpesvirus_2
TaxID: 10317
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 65-263
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 364.9 | 1.20e-108 | 100.0% | 24.3% |
| PF00270.36 | DEAD | 29.7 | 6.90e-07 | 77.9% | 88.0% |
D2
medium
residues 46-64_266-289_376-530
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 263.5 | 5.50e-78 | 80.8% | 18.5% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 26.0 | 3.31e-01 | 88.9% | 81.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3481149 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 24.0 | 2.78e-01 | 88.9% | 54.0% |
| 3332811 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.51 | 30.0 | 3.03e-01 | 89.4% | 56.1% |
| 5052857 | 2003.1.1.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AlaDh_PNT_C | 0.51 | 26.0 | 2.97e-01 | 83.3% | 64.1% |
D3
medium
residues 567-682
Domain cluster:
rep: DNA_replication_origin-binding_helicase__YP_010084982__Beluga_whale_alphaherpesvirus_1__1434720__D546-648
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 111.8 | 4.10e-32 | 100.0% | 13.8% |