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DNA_terminal_protein_pTP

Euk-Vir

bat_adenovirus_3

DNA_terminal_protein_pTP__YP_005271183__bat_adenovirus_3__2758098

Identity

Accession:
YP_005271183 ↗
Protein ID:
DNA_terminal_protein_pTP
Kingdom:
euk

Quality

76.0 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› bat_adenovirus_3

TaxID: 2758098

Cluster

View cluster (53 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-123_567-594
PDB
Domain cluster: rep: pTP__YP_009051655__Lizard_adenovirus_2__874272__D3-127_576-605
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02459.21 best Adeno_terminal 79.4 3.20e-22 44.2% 12.0%
D2 medium residues 124-193_404-566
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02459.21 best Adeno_terminal 223.3 7.80e-66 73.0% 29.9%
PF02459.21 Adeno_terminal 77.5 1.20e-21 28.8% 10.0%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.76 33.0 5.08e-01 96.1% 97.9%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.71 32.0 4.14e-01 100.0% 71.4%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.70 37.0 5.02e-01 99.1% 98.3%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.68 28.0 3.51e-01 99.1% 59.1%
3gqcC04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 35.0 4.88e-01 100.0% 99.2%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 29.0 4.10e-01 99.1% 87.3%
3hqiA01 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.62 37.0 4.69e-01 100.0% 97.8%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 27.0 3.89e-01 98.3% 86.5%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 27.0 3.90e-01 97.4% 88.1%
6lsaC01 2.70.230.10 Mainly Beta › Distorted Sandwich › Glycoprotein D; Chain: A; › 0.58 33.0 3.53e-01 98.3% 61.1%
3b7yA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 25.0 3.18e-01 91.8% 63.2%
6nifA01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.57 31.0 3.34e-01 96.6% 58.8%
2icwG01 1.20.120.390 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 0.57 31.0 4.17e-01 100.0% 100.0%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.57 27.0 3.34e-01 99.6% 69.4%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.55 29.0 3.65e-01 94.8% 81.4%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 28.0 3.58e-01 70.0% 83.1%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 31.0 3.91e-01 99.1% 95.0%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 30.0 3.77e-01 98.3% 91.0%
1wscA01 3.30.700.20 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 0.52 27.0 3.33e-01 100.0% 77.2%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 25.0 3.20e-01 75.1% 78.8%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955989 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 28.0 4.40e-01 99.1% 81.1%
3240764 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.74 33.0 4.30e-01 100.0% 72.6%
3998968 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.70 33.0 4.15e-01 100.0% 71.0%
3876166 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.68 33.0 4.27e-01 100.0% 77.1%
5037623 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 26.0 3.80e-01 99.1% 78.1%
3604576 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 29.0 4.39e-01 100.0% 100.0%
4968129 11.1.1.1424 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 0.64 27.0 4.03e-01 97.9% 87.6%
4401497 11.1.1.329 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GbpA_D3 0.63 25.0 3.70e-01 99.6% 82.0%
3364460 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.63 32.0 4.02e-01 99.1% 78.6%
3241390 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.62 35.0 4.16e-01 100.0% 79.4%
3214839 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.59 38.0 4.48e-01 100.0% 91.9%
3493644 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.59 33.0 3.92e-01 100.0% 77.6%
3915206 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.58 33.0 3.79e-01 100.0% 73.1%
3420779 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.56 32.0 3.85e-01 99.6% 81.2%
4962721 4139.1.1.1 ↗ a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.55 28.0 3.62e-01 100.0% 83.8%
5035960 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 24.0 3.40e-01 98.7% 85.7%
3740347 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.55 33.0 3.85e-01 99.6% 82.4%
4937355 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 28.0 3.71e-01 100.0% 87.7%
4026929 3871.1.1.1 ↗ alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.54 38.0 3.86e-01 72.1% 86.4%
3635442 4139.1.1.1 ↗ a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.52 27.0 3.45e-01 98.7% 82.7%
4019886 633.10.1.0 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.50 29.0 3.65e-01 70.0% 94.8%
D3 medium residues 206-337_375-403
PDB