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DNA_topoisomerase_II
Euk-VirChrysochromulina_ericina_virus
DNA_topoisomerase_II__YP_009173327__Chrysochromulina_ericina_virus__455364
Identity
- Accession:
- YP_009173327 ↗
- Protein ID:
- DNA_topoisomerase_II
- Kingdom:
- euk
Quality
86.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Chrysochromulina_ericina_virus
TaxID: 455364
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 271-400
Domain cluster:
rep: DNA_gyrase_subunit_B__YP_009352802__Kaumoebavirus_Viruses.__X__D311-415
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00204.32 best | DNA_gyraseB | 79.4 | 3.20e-22 | 97.7% | 66.7% |
D2
high
residues 1003-1131
Domain cluster:
rep: KM209246.1__AIM51491.1__HQ82_0234__00002__D56-167
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00521.27 best | DNA_topoisoIV | 39.4 | 4.90e-10 | 90.7% | 26.2% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.92 | 71.0 | 7.89e-01 | 79.1% | 100.0% |
| 3qx3A04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.91 | 65.0 | 7.34e-01 | 72.9% | 100.0% |
| 1bgwA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.90 | 66.0 | 7.13e-01 | 74.4% | 100.0% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.81 | 43.0 | 4.53e-01 | 87.6% | 57.3% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.80 | 48.0 | 4.65e-01 | 89.1% | 54.9% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.78 | 38.0 | 4.88e-01 | 85.3% | 79.2% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.77 | 48.0 | 5.13e-01 | 85.3% | 71.4% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.77 | 52.0 | 6.19e-01 | 72.9% | 100.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 45.0 | 5.70e-01 | 87.6% | 96.2% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.77 | 68.0 | 6.66e-01 | 96.1% | 87.1% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 33.0 | 3.84e-01 | 84.5% | 55.9% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 43.0 | 5.03e-01 | 91.5% | 76.8% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 40.0 | 4.37e-01 | 86.0% | 63.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 44.0 | 4.93e-01 | 85.3% | 78.4% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 41.0 | 4.98e-01 | 79.8% | 86.0% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 39.0 | 4.28e-01 | 85.3% | 66.0% |
| 5mawD00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.69 | 57.0 | 4.42e-01 | 86.0% | 80.4% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.69 | 38.0 | 4.18e-01 | 86.8% | 65.1% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.66 | 41.0 | 4.43e-01 | 91.5% | 73.4% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.64 | 35.0 | 3.53e-01 | 89.1% | 51.9% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.63 | 47.0 | 3.78e-01 | 86.8% | 43.2% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.63 | 52.0 | 4.60e-01 | 86.8% | 84.2% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 41.0 | 4.72e-01 | 85.3% | 90.4% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.63 | 51.0 | 4.55e-01 | 87.6% | 90.4% |
| 1jmwA00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.62 | 50.0 | 4.79e-01 | 85.3% | 98.6% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 40.0 | 4.35e-01 | 85.3% | 79.8% |
| 4ys0A02 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.59 | 33.0 | 2.98e-01 | 80.6% | 41.2% |
| 7b7tA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 51.0 | 4.69e-01 | 91.5% | 84.5% |
| 1jqkA03 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 49.0 | 4.38e-01 | 89.9% | 78.3% |
| 3i01A01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 49.0 | 4.41e-01 | 91.5% | 82.5% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 4.39e-01 | 86.8% | 71.1% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.55 | 45.0 | 4.61e-01 | 84.5% | 92.0% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 43.0 | 4.15e-01 | 81.4% | 77.1% |
| 4cgkA01 | 6.10.250.3150 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 44.0 | 3.67e-01 | 84.5% | 51.9% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 49.0 | 4.63e-01 | 96.1% | 96.1% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 48.0 | 4.20e-01 | 91.5% | 79.0% |
| 3qa8A04 | 1.20.1270.250 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 39.0 | 3.18e-01 | 85.3% | 41.6% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 47.0 | 3.90e-01 | 91.5% | 68.2% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.54 | 40.0 | 4.16e-01 | 76.7% | 91.6% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.54 | 45.0 | 4.28e-01 | 86.8% | 83.6% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 39.0 | 3.75e-01 | 74.4% | 79.7% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 29.0 | 3.58e-01 | 84.5% | 85.2% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 45.0 | 3.65e-01 | 91.5% | 70.7% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 38.0 | 3.60e-01 | 76.7% | 76.1% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.52 | 30.0 | 3.15e-01 | 86.8% | 62.3% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.51 | 44.0 | 3.76e-01 | 93.8% | 83.0% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 39.0 | 3.84e-01 | 79.8% | 99.3% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 42.0 | 3.45e-01 | 87.6% | 69.0% |
| 2m6bA00 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 41.0 | 3.98e-01 | 88.4% | 94.7% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 35.0 | 3.96e-01 | 91.5% | 92.2% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3328306 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.97 | 95.0 | 8.06e-01 | 100.0% | 84.2% |
| 3789604 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.97 | 94.0 | 8.85e-01 | 100.0% | 92.0% |
| 3708939 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.97 | 91.0 | 8.43e-01 | 100.0% | 80.6% |
| 3276180 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.96 | 94.0 | 7.89e-01 | 100.0% | 86.2% |
| 3718739 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.96 | 94.0 | 8.44e-01 | 100.0% | 89.1% |
| 3610015 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.96 | 94.0 | 8.42e-01 | 100.0% | 84.8% |
| 3634044 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.96 | 93.0 | 7.93e-01 | 100.0% | 83.2% |
| 3600354 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.96 | 90.0 | 8.47e-01 | 100.0% | 83.3% |
| 3652359 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.96 | 93.0 | 8.28e-01 | 100.0% | 77.1% |
| 3625174 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.95 | 92.0 | 7.54e-01 | 100.0% | 82.9% |
| 3768919 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 91.0 | 6.60e-01 | 99.2% | 53.0% |
| 3508111 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 91.0 | 7.94e-01 | 100.0% | 91.7% |
| 4238706 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.94 | 91.0 | 6.59e-01 | 100.0% | 51.8% |
| 3630114 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 89.0 | 8.47e-01 | 97.7% | 93.1% |
| 3935542 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 89.0 | 8.33e-01 | 97.7% | 84.7% |
| 4452951 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.93 | 89.0 | 7.89e-01 | 100.0% | 86.3% |
| 4830953 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.91 | 87.0 | 7.70e-01 | 100.0% | 79.2% |
| 3220667 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.91 | 84.0 | 8.25e-01 | 96.1% | 96.3% |
| 3267708 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.90 | 86.0 | 8.22e-01 | 100.0% | 91.0% |
| 223696 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.89 | 84.0 | 7.95e-01 | 100.0% | 90.1% |
| 2443871 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.88 | 83.0 | 7.57e-01 | 100.0% | 91.0% |
| 5055566 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 46.0 | 4.92e-01 | 87.6% | 59.1% |
| 3864224 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.87 | 41.0 | 3.73e-01 | 84.5% | 37.0% |
| 3096549 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.86 | 81.0 | 7.35e-01 | 100.0% | 91.0% |
| 3833806 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.83 | 67.0 | 6.39e-01 | 83.7% | 75.9% |
| 5024978 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.82 | 77.0 | 7.34e-01 | 99.2% | 87.6% |
| 5083298 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.81 | 76.0 | 7.18e-01 | 99.2% | 84.7% |
| 4373100 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.81 | 74.0 | 7.13e-01 | 96.9% | 86.9% |
| 4552385 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.81 | 74.0 | 6.94e-01 | 99.2% | 81.3% |
| 1780091 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.80 | 74.0 | 6.86e-01 | 99.2% | 80.4% |
| 4570966 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.79 | 73.0 | 6.94e-01 | 98.4% | 88.0% |
| 2325068 | 3755.3.1.148 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC | 0.78 | 45.0 | 3.85e-01 | 84.5% | 39.4% |
| 4883080 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.78 | 72.0 | 7.10e-01 | 98.4% | 94.8% |
| 4174306 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.76 | 70.0 | 6.68e-01 | 100.0% | 86.0% |
| 3770253 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 42.0 | 3.67e-01 | 89.9% | 40.5% |
| 3987991 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.68 | 49.0 | 4.11e-01 | 85.3% | 45.7% |
| 4324499 | 3755.1.1.3 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM | 0.67 | 47.0 | 4.50e-01 | 87.6% | 63.4% |
| 4946656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 43.0 | 4.51e-01 | 87.6% | 70.0% |
| 3839889 | 601.51.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin | 0.66 | 55.0 | 5.25e-01 | 86.0% | 93.1% |
| 4940954 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 48.0 | 3.59e-01 | 86.8% | 34.3% |
| 3639658 | 1072.1.1.1 ↗ | alpha bundles › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › CDC37_N | 0.64 | 51.0 | 4.70e-01 | 84.5% | 76.4% |
| 5047089 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 34.0 | 3.68e-01 | 83.7% | 60.0% |
| 3853566 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.63 | 37.0 | 3.91e-01 | 89.1% | 65.2% |
| 3249720 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.61 | 50.0 | 5.03e-01 | 86.8% | 100.0% |
| 4013477 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.61 | 39.0 | 4.19e-01 | 92.2% | 75.5% |
| 3871823 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.58 | 47.0 | 3.03e-01 | 83.7% | 22.0% |
| 3741747 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.58 | 45.0 | 3.55e-01 | 84.5% | 58.2% |
| 3699448 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.57 | 47.0 | 4.28e-01 | 85.3% | 97.6% |
| 3546316 | 3922.1.1.186 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › WWC1 | 0.57 | 47.0 | 4.05e-01 | 92.2% | 59.5% |
| 3213281 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.56 | 49.0 | 3.76e-01 | 91.5% | 78.5% |
| 3818265 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.56 | 47.0 | 4.34e-01 | 85.3% | 85.2% |
| 4001188 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 43.0 | 2.90e-01 | 87.6% | 23.4% |
| 4077196 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.56 | 46.0 | 3.02e-01 | 85.3% | 36.9% |
| 4943562 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 46.0 | 3.88e-01 | 85.3% | 59.0% |
| 4178099 | 632.22.1.176 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF27734 | 0.56 | 43.0 | 4.00e-01 | 87.6% | 65.8% |
| 3393894 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.56 | 47.0 | 4.25e-01 | 86.8% | 83.6% |
| 1291200 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.56 | 49.0 | 3.65e-01 | 91.5% | 74.8% |
| 4551983 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.55 | 45.0 | 3.50e-01 | 85.3% | 81.5% |
| 3706820 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 43.0 | 3.95e-01 | 86.8% | 64.4% |
| 3593528 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 45.0 | 4.34e-01 | 87.6% | 75.3% |
| 3908810 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.55 | 48.0 | 3.61e-01 | 92.2% | 71.5% |
| 4998688 | 192.2.1.89 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 | 0.55 | 42.0 | 3.31e-01 | 85.3% | 41.6% |
| 3605247 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 45.0 | 4.16e-01 | 84.5% | 72.9% |
| 5002102 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 42.0 | 3.78e-01 | 87.6% | 60.6% |
| 3254000 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.54 | 47.0 | 3.63e-01 | 91.5% | 65.8% |
| 4540951 | 3755.3.1.469 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CC_PcsB | 0.54 | 41.0 | 3.27e-01 | 86.0% | 41.2% |
| 3519973 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 45.0 | 3.54e-01 | 87.6% | 47.8% |
| 3605639 | 1189.1.1.6 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › ISG65-75 | 0.53 | 46.0 | 3.46e-01 | 93.0% | 72.8% |
| 3207855 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 42.0 | 3.95e-01 | 87.6% | 70.7% |
| 4941675 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 43.0 | 2.82e-01 | 84.5% | 23.1% |
| 3412891 | 150.1.1.31 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Tweety | 0.53 | 47.0 | 3.62e-01 | 95.3% | 68.0% |
| 4980098 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.52 | 43.0 | 3.36e-01 | 87.6% | 77.0% |
| 5002671 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.52 | 42.0 | 3.91e-01 | 86.0% | 68.8% |
| 3778005 | 604.1.1.55 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › RasGAP_C | 0.51 | 37.0 | 3.69e-01 | 89.1% | 70.4% |
| 3201650 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 33.0 | 3.19e-01 | 86.8% | 55.3% |
| 3213527 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.51 | 44.0 | 3.35e-01 | 92.2% | 73.7% |
| 3415933 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 42.0 | 3.99e-01 | 86.8% | 86.0% |
| 3878898 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 44.0 | 3.62e-01 | 90.7% | 80.5% |
D3
medium
residues 18-95_237-269
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pvgA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.84 | 80.0 | 5.90e-01 | 98.2% | 98.8% |
| 1d0xA04 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.60 | 41.0 | 3.87e-01 | 71.2% | 87.6% |
| 3pf7B00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.54 | 44.0 | 2.94e-01 | 90.1% | 71.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4617838 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.84 | 71.0 | 5.32e-01 | 88.3% | 95.1% |
| 3594649 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.84 | 71.0 | 5.31e-01 | 88.3% | 95.1% |
| 3317524 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.76 | 53.0 | 4.09e-01 | 81.1% | 36.2% |
| 3711985 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.55 | 43.0 | 3.33e-01 | 83.8% | 94.0% |
| 3495008 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.55 | 43.0 | 3.00e-01 | 82.0% | 76.4% |
| 3996971 | 859.1.1.3 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG101 | 0.53 | 41.0 | 3.25e-01 | 81.1% | 54.9% |
| 3544881 | 109.4.1.363 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tcf25 | 0.51 | 39.0 | 2.81e-01 | 82.0% | 83.3% |
| 4965147 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.51 | 39.0 | 3.09e-01 | 82.9% | 81.7% |
D4
medium
residues 96-236
D5
medium
residues 408-526_546-553
Domain cluster:
rep: gwa1_scaffold_0_prodigal-single.1__X__X__00376__D402-500_832-856
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01751.29 best | Toprim | 27.7 | 3.50e-06 | 73.2% | 72.9% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bgwA02 | 3.40.50.670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 71.0 | 6.28e-01 | 97.6% | 81.9% |
| 7wgrA03 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.65 | 50.0 | 5.00e-01 | 92.9% | 78.6% |
| 1umdB02 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 45.0 | 4.56e-01 | 92.1% | 75.0% |
| 1itzA03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 44.0 | 4.49e-01 | 93.7% | 74.8% |
| 6q2eA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.61 | 36.0 | 4.31e-01 | 81.1% | 86.2% |
| 3od1A02 | 3.40.50.12590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 30.0 | 4.13e-01 | 74.8% | 100.0% |
| 4tkzA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.60 | 42.0 | 4.21e-01 | 82.7% | 70.0% |
| 3lzdA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.59 | 36.0 | 4.03e-01 | 81.1% | 78.9% |
| 1jmkC01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 45.0 | 4.06e-01 | 94.5% | 59.3% |
| 2jfqA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 4.64e-01 | 81.9% | 88.6% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 40.0 | 3.65e-01 | 82.7% | 53.9% |
| 1gzhD02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.58 | 34.0 | 3.57e-01 | 86.6% | 62.2% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 38.0 | 3.93e-01 | 80.3% | 71.8% |
| 2jfnA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 44.0 | 4.63e-01 | 81.9% | 89.5% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 41.0 | 3.77e-01 | 81.1% | 57.7% |
| 3n0xA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 41.0 | 3.77e-01 | 82.7% | 57.9% |
| 2h9aA02 | 3.40.50.11600 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 46.0 | 4.64e-01 | 92.9% | 86.5% |
| 2vxbA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.56 | 30.0 | 3.61e-01 | 87.4% | 79.0% |
| 1xktA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 43.0 | 3.84e-01 | 92.9% | 56.8% |
| 2dgdA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 4.49e-01 | 85.8% | 100.0% |
| 4p53A01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 40.0 | 3.68e-01 | 81.1% | 56.2% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 38.0 | 3.41e-01 | 82.7% | 50.0% |
| 1d3yB02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.55 | 48.0 | 4.02e-01 | 93.7% | 60.8% |
| 2jfzA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 4.45e-01 | 82.7% | 88.1% |
| 3hriA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 35.0 | 4.00e-01 | 85.0% | 92.0% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 36.0 | 4.00e-01 | 86.6% | 86.7% |
| 1cvrA01 | 3.40.50.10390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 | 0.54 | 43.0 | 4.45e-01 | 83.5% | 91.5% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 35.0 | 3.87e-01 | 82.7% | 85.6% |
| 4qgsA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.80e-01 | 82.7% | 65.1% |
| 2ynmC02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 41.0 | 4.03e-01 | 81.9% | 76.3% |
| 1jflA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 4.20e-01 | 81.1% | 89.9% |
| 4f2gA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.53 | 35.0 | 3.35e-01 | 83.5% | 57.1% |
| 3grfA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.52 | 31.0 | 3.11e-01 | 82.7% | 53.6% |
| 4mcjG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 4.00e-01 | 94.5% | 72.7% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 36.0 | 3.81e-01 | 97.6% | 81.8% |
| 2o1mA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 31.0 | 3.19e-01 | 81.1% | 61.2% |
| 1jfrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.53e-01 | 94.5% | 48.1% |
| 1fj2A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.79e-01 | 100.0% | 73.8% |
| 1ufoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.61e-01 | 95.3% | 54.0% |
| 3l41A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.51 | 33.0 | 3.48e-01 | 86.6% | 73.5% |
| 2bonA01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.50 | 38.0 | 3.81e-01 | 79.5% | 100.0% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1165402 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.96 | 90.0 | 8.57e-01 | 96.9% | 97.9% |
| 3551383 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.95 | 92.0 | 6.70e-01 | 100.0% | 50.3% |
| 3213306 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.94 | 88.0 | 6.57e-01 | 96.1% | 51.9% |
| 4876995 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.93 | 81.0 | 8.08e-01 | 89.0% | 100.0% |
| 3789608 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.92 | 86.0 | 6.40e-01 | 96.1% | 50.9% |
| 3594652 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.91 | 86.0 | 6.38e-01 | 96.9% | 51.3% |
| 4878011 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.85 | 77.0 | 6.27e-01 | 93.7% | 59.2% |
| 3520955 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.84 | 78.0 | 5.90e-01 | 96.1% | 49.1% |
| 4945733 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.84 | 76.0 | 5.86e-01 | 94.5% | 51.2% |
| None | — | 0.83 | 77.0 | 6.04e-01 | 96.1% | 55.2% | |
| 3964707 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.83 | 76.0 | 6.03e-01 | 95.3% | 55.7% |
| 5059966 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.82 | 66.0 | 7.14e-01 | 83.5% | 100.0% |
| 3164150 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.82 | 75.0 | 5.98e-01 | 95.3% | 56.4% |
| 1878568 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.82 | 73.0 | 7.17e-01 | 92.9% | 92.5% |
| 4100838 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.81 | 73.0 | 5.88e-01 | 93.7% | 57.6% |
| None | — | 0.81 | 78.0 | 6.73e-01 | 100.0% | 76.5% | |
| 2452014 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.81 | 74.0 | 5.83e-01 | 96.1% | 54.4% |
| 1759361 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.76 | 71.0 | 6.76e-01 | 97.6% | 97.9% |
| 4324572 | 2007.1.3.42 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF29921 | 0.67 | 42.0 | 4.14e-01 | 84.3% | 58.5% |
| 4375310 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.67 | 51.0 | 5.18e-01 | 92.9% | 80.8% |
| 4953479 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.66 | 46.0 | 4.98e-01 | 92.9% | 82.7% |
| 4052999 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.66 | 30.0 | 4.37e-01 | 75.6% | 100.0% |
| 3771364 | 7522.1.1.3 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C | 0.65 | 50.0 | 4.96e-01 | 93.7% | 75.6% |
| 3940898 | 7522.1.1.3 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C | 0.65 | 50.0 | 4.81e-01 | 93.7% | 70.8% |
| 5048291 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.65 | 45.0 | 4.79e-01 | 92.9% | 79.1% |
| 4946085 | 2007.1.7.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 | 0.65 | 43.0 | 3.92e-01 | 81.1% | 51.5% |
| 3567975 | 7522.1.1.3 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C | 0.64 | 51.0 | 4.94e-01 | 93.7% | 75.0% |
| 4946545 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.64 | 45.0 | 4.76e-01 | 93.7% | 80.0% |
| 4929208 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.62 | 38.0 | 4.28e-01 | 81.1% | 80.0% |
| 5021609 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.62 | 44.0 | 4.66e-01 | 92.9% | 81.6% |
| 4971249 | 2007.1.10.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like | 0.62 | 38.0 | 4.38e-01 | 86.6% | 82.1% |
| 5054900 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.62 | 47.0 | 4.42e-01 | 93.7% | 66.7% |
| 3723137 | 7522.1.1.3 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C | 0.61 | 50.0 | 4.77e-01 | 92.9% | 73.3% |
| 5018445 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.61 | 47.0 | 4.54e-01 | 92.9% | 72.1% |
| 5030600 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.61 | 36.0 | 4.14e-01 | 81.1% | 78.9% |
| 3823490 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.61 | 42.0 | 3.70e-01 | 81.1% | 48.6% |
| 4031610 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.61 | 41.0 | 3.44e-01 | 85.8% | 40.2% |
| 3947905 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.61 | 42.0 | 4.23e-01 | 81.1% | 71.2% |
| 4246539 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.60 | 42.0 | 3.79e-01 | 81.1% | 52.6% |
| 3587277 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.59 | 41.0 | 4.15e-01 | 82.7% | 70.8% |
| 3697509 | 7568.1.1.14 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › NIBRIN_BRCT_II | 0.59 | 45.0 | 4.54e-01 | 86.6% | 81.6% |
| 4932292 | 7595.1.1.2 ↗ | a/b three-layered sandwiches › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › DUF6513 | 0.58 | 36.0 | 3.90e-01 | 82.7% | 71.8% |
| 5083260 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.58 | 36.0 | 3.99e-01 | 81.9% | 76.2% |
| 4886405 | 4002.1.1.2 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.58 | 41.0 | 3.75e-01 | 81.9% | 55.3% |
| 4209227 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.58 | 32.0 | 3.57e-01 | 80.3% | 68.0% |
| 2050056 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.57 | 41.0 | 4.43e-01 | 87.4% | 88.7% |
| 4944763 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.57 | 43.0 | 3.99e-01 | 96.9% | 63.1% |
| 5046178 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 41.0 | 4.09e-01 | 82.7% | 73.1% |
| 3658466 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.56 | 44.0 | 4.65e-01 | 92.1% | 91.3% |
| None | — | 0.56 | 40.0 | 3.63e-01 | 81.9% | 54.3% | |
| 3178717 | 7579.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like | 0.56 | 48.0 | 3.35e-01 | 94.5% | 34.4% |
| 4951984 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.55 | 44.0 | 4.03e-01 | 100.0% | 63.5% |
| 5044161 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.55 | 42.0 | 3.83e-01 | 96.9% | 58.9% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.55 | 34.0 | 3.92e-01 | 82.7% | 89.4% |
| 1312813 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.55 | 47.0 | 3.89e-01 | 92.9% | 58.0% |
| 3993695 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.54 | 45.0 | 3.90e-01 | 96.1% | 57.0% |
| 4024370 | 7577.1.1.5 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SHMT | 0.54 | 39.0 | 2.94e-01 | 82.7% | 31.9% |
| 5010696 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.54 | 36.0 | 3.83e-01 | 97.6% | 76.3% |
| 4671615 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.53 | 36.0 | 3.94e-01 | 97.6% | 84.8% |
| 1397999 | 7576.1.1.1 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 | 0.53 | 42.0 | 4.04e-01 | 83.5% | 77.6% |
| 2032264 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.53 | 41.0 | 3.64e-01 | 82.7% | 71.9% |
| 3826893 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 45.0 | 3.73e-01 | 93.7% | 68.4% |
| 3485118 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.52 | 45.0 | 4.19e-01 | 94.5% | 86.3% |
| 4021824 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 45.0 | 3.23e-01 | 96.1% | 33.7% |
| 4209926 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.52 | 34.0 | 3.77e-01 | 83.5% | 87.4% |
| 5064251 | 2003.1.14.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N | 0.51 | 37.0 | 3.40e-01 | 83.5% | 57.6% |
| 5000969 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.51 | 43.0 | 3.79e-01 | 96.9% | 62.7% |
| 4983543 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.51 | 43.0 | 3.81e-01 | 96.9% | 62.7% |
| 3961881 | 7579.1.1.17 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S15 | 0.51 | 44.0 | 3.22e-01 | 96.1% | 35.8% |
| 5076169 | 2003.1.14.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N | 0.50 | 36.0 | 3.43e-01 | 83.5% | 61.3% |
| 3231032 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.50 | 43.0 | 4.10e-01 | 94.5% | 91.3% |
| 4930288 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.50 | 37.0 | 3.96e-01 | 82.7% | 90.0% |
D6
medium
residues 604-666
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16898.11 best | TOPRIM_C | 49.0 | 9.90e-13 | 100.0% | 50.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3551383 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.91 | 85.0 | 5.30e-01 | 100.0% | 26.6% |
| 3789608 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.90 | 84.0 | 5.30e-01 | 100.0% | 24.7% |
| 3213306 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.89 | 82.0 | 5.25e-01 | 100.0% | 28.5% |
| 3594652 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.87 | 81.0 | 5.13e-01 | 100.0% | 24.4% |
| 3817446 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.82 | 73.0 | 5.22e-01 | 100.0% | 35.0% |
| None | — | 0.56 | 38.0 | 3.05e-01 | 73.0% | 91.4% | |
| 4997019 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.50 | 34.0 | 2.75e-01 | 71.4% | 77.0% |
D7
medium
residues 681-809
Domain cluster:
rep: DNA_topoisomerase_2__YP_009162467__Salmon_gill_poxvirus__1680908__D669-796
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00521.27 best | DNA_topoisoIV | 155.8 | 2.40e-45 | 100.0% | 29.7% |
D8
medium
residues 878-969
Domain cluster:
representative
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gccA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.94 | 73.0 | 7.61e-01 | 100.0% | 86.0% |
| 3qx3B03 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.91 | 71.0 | 6.91e-01 | 100.0% | 75.0% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.85 | 67.0 | 6.50e-01 | 100.0% | 75.5% |
| 6bq9A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.80 | 60.0 | 6.02e-01 | 100.0% | 77.7% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.77 | 62.0 | 6.17e-01 | 100.0% | 83.0% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.70 | 49.0 | 3.82e-01 | 72.8% | 35.1% |
| 3hxiA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.68 | 52.0 | 4.23e-01 | 94.6% | 43.9% |
| 5abxA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.67 | 50.0 | 4.08e-01 | 94.6% | 42.2% |
| 2e5gA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 46.0 | 5.06e-01 | 94.6% | 93.1% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 42.0 | 4.60e-01 | 71.7% | 81.3% |
| 2av5A00 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.64 | 48.0 | 4.62e-01 | 94.6% | 68.9% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 45.0 | 4.54e-01 | 72.8% | 74.2% |
| 1sjrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 45.0 | 4.27e-01 | 94.6% | 62.0% |
| 2gqqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.64 | 44.0 | 4.60e-01 | 94.6% | 77.6% |
| 1s79A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 48.0 | 4.62e-01 | 95.7% | 70.9% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.63 | 56.0 | 3.92e-01 | 100.0% | 44.8% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 45.0 | 4.71e-01 | 95.7% | 82.9% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 44.0 | 4.51e-01 | 77.2% | 76.7% |
| 3h7hB00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.63 | 44.0 | 4.37e-01 | 92.4% | 70.5% |
| 2wmcA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.63 | 49.0 | 4.01e-01 | 95.7% | 44.8% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 45.0 | 4.42e-01 | 95.7% | 69.7% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 47.0 | 4.82e-01 | 94.6% | 85.1% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 4.62e-01 | 94.6% | 83.7% |
| 2g4bA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 47.0 | 4.71e-01 | 95.7% | 79.6% |
| 4uy9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 43.0 | 4.36e-01 | 72.8% | 76.7% |
| 3nynA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 43.0 | 3.69e-01 | 72.8% | 47.6% |
| 2m9kA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 46.0 | 4.61e-01 | 94.6% | 78.5% |
| 3hheA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 45.0 | 4.83e-01 | 93.5% | 92.3% |
| 1wwhA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 43.0 | 4.69e-01 | 95.7% | 91.9% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 47.0 | 4.89e-01 | 94.6% | 92.7% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 41.0 | 4.14e-01 | 94.6% | 68.8% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.47e-01 | 94.6% | 75.5% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 43.0 | 4.47e-01 | 94.6% | 82.4% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.60 | 45.0 | 4.35e-01 | 94.6% | 70.8% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.51e-01 | 93.5% | 78.9% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.60 | 44.0 | 4.38e-01 | 93.5% | 75.5% |
| 3nynB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 41.0 | 3.00e-01 | 71.7% | 26.3% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 47.0 | 4.69e-01 | 90.2% | 85.3% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 41.0 | 4.08e-01 | 71.7% | 75.5% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 41.0 | 4.25e-01 | 77.2% | 78.2% |
| 2joeA01 | 3.30.1830.10 | Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like | 0.58 | 50.0 | 4.45e-01 | 92.4% | 85.2% |
| 6fdyU01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 40.0 | 4.30e-01 | 71.7% | 85.0% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 4.26e-01 | 77.2% | 80.0% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 42.0 | 4.62e-01 | 93.5% | 92.0% |
| 4bwpB01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 52.0 | 3.82e-01 | 100.0% | 55.6% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.58 | 44.0 | 4.32e-01 | 95.7% | 74.5% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 40.0 | 4.18e-01 | 95.7% | 79.8% |
| 6n3dA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 44.0 | 4.54e-01 | 93.5% | 87.2% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 4.39e-01 | 75.0% | 91.0% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 4.41e-01 | 94.6% | 79.8% |
| 3s6eB00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 44.0 | 4.17e-01 | 96.7% | 69.4% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.36e-01 | 94.6% | 77.1% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 4.14e-01 | 94.6% | 72.8% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 4.11e-01 | 93.5% | 74.0% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 4.10e-01 | 94.6% | 94.5% |
| 4qu6A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 42.0 | 4.24e-01 | 94.6% | 83.3% |
| 4o4bB00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.55 | 48.0 | 3.57e-01 | 100.0% | 82.4% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 4.10e-01 | 94.6% | 75.2% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 4.15e-01 | 94.6% | 77.5% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.54 | 44.0 | 3.93e-01 | 95.7% | 61.9% |
| 3w9iA06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.54 | 45.0 | 4.44e-01 | 94.6% | 85.3% |
| 4xr7E01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 46.0 | 3.31e-01 | 100.0% | 45.8% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 4.10e-01 | 94.6% | 82.8% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 4.15e-01 | 94.6% | 80.2% |
| 1wh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 4.34e-01 | 96.7% | 88.3% |
| 3hx9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 4.08e-01 | 94.6% | 82.7% |
| 2mobA00 | 3.90.56.10 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM | 0.52 | 42.0 | 4.24e-01 | 89.1% | 94.7% |
| 1xkpC00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 45.0 | 4.11e-01 | 100.0% | 73.0% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.51 | 42.0 | 4.13e-01 | 94.6% | 88.1% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.04e-01 | 94.6% | 80.6% |
| 3fpwA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.50 | 37.0 | 3.42e-01 | 79.3% | 83.2% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614277 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.90 | 67.0 | 5.20e-01 | 100.0% | 39.4% |
| 3188905 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.87 | 72.0 | 5.59e-01 | 100.0% | 43.9% |
| 3096551 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.81 | 69.0 | 5.34e-01 | 100.0% | 44.9% |
| 3932148 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 47.0 | 4.90e-01 | 95.7% | 74.1% |
| 3617026 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.68 | 55.0 | 3.85e-01 | 88.0% | 67.7% |
| 3739160 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.67 | 47.0 | 4.59e-01 | 96.7% | 67.0% |
| 4104254 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.66 | 46.0 | 4.47e-01 | 94.6% | 63.8% |
| 3486351 | 304.17.1.0 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain | 0.66 | 46.0 | 4.39e-01 | 94.6% | 60.9% |
| 3373813 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 55.0 | 3.42e-01 | 89.1% | 40.8% |
| 3863832 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 45.0 | 4.33e-01 | 94.6% | 61.9% |
| 4024263 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.65 | 59.0 | 4.49e-01 | 100.0% | 50.7% |
| 3222428 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.65 | 54.0 | 3.83e-01 | 90.2% | 69.6% |
| 3924393 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.65 | 46.0 | 4.54e-01 | 94.6% | 68.0% |
| 4999312 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.65 | 51.0 | 5.09e-01 | 96.7% | 81.1% |
| 3700463 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 54.0 | 3.78e-01 | 90.2% | 70.7% |
| 3699404 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.65 | 43.0 | 4.61e-01 | 94.6% | 78.8% |
| 3940307 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.65 | 47.0 | 4.60e-01 | 95.7% | 70.0% |
| 3926163 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 58.0 | 4.01e-01 | 100.0% | 46.2% |
| 3483586 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 51.0 | 3.46e-01 | 90.2% | 63.6% |
| 3284662 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.62 | 47.0 | 4.75e-01 | 93.5% | 81.1% |
| 1178470 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 46.0 | 4.84e-01 | 93.5% | 87.8% |
| 3362205 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 55.0 | 3.92e-01 | 100.0% | 46.4% |
| 3734198 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 45.0 | 4.30e-01 | 94.6% | 65.5% |
| 3645166 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 54.0 | 3.89e-01 | 98.9% | 48.0% |
| 4272563 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.61 | 51.0 | 5.04e-01 | 100.0% | 85.0% |
| 3488012 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 55.0 | 3.86e-01 | 100.0% | 48.1% |
| 5072410 | 306.6.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › GH3_C | 0.61 | 48.0 | 4.91e-01 | 98.9% | 87.8% |
| 3665483 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.61 | 53.0 | 3.61e-01 | 100.0% | 43.1% |
| 3707666 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 55.0 | 3.75e-01 | 100.0% | 42.4% |
| 3607364 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 43.0 | 4.06e-01 | 94.6% | 59.1% |
| 3885537 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.61 | 44.0 | 4.83e-01 | 93.5% | 93.3% |
| 3363115 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 54.0 | 3.85e-01 | 100.0% | 47.0% |
| 3264347 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.61 | 54.0 | 3.90e-01 | 100.0% | 51.3% |
| 3715910 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 54.0 | 3.65e-01 | 100.0% | 37.7% |
| 3469996 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 54.0 | 3.76e-01 | 100.0% | 41.9% |
| 4376910 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.60 | 53.0 | 5.27e-01 | 100.0% | 93.7% |
| 3177508 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.60 | 53.0 | 3.64e-01 | 100.0% | 50.6% |
| 3994783 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 45.0 | 4.05e-01 | 94.6% | 56.9% |
| None | — | 0.60 | 52.0 | 3.61e-01 | 100.0% | 43.3% | |
| None | — | 0.60 | 52.0 | 3.14e-01 | 100.0% | 20.7% | |
| 3371886 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 52.0 | 3.11e-01 | 100.0% | 19.9% |
| 3453348 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 52.0 | 2.95e-01 | 100.0% | 12.8% |
| None | — | 0.59 | 52.0 | 2.97e-01 | 100.0% | 14.5% | |
| 5072239 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.59 | 42.0 | 4.30e-01 | 93.5% | 76.7% |
| 3435863 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 52.0 | 4.01e-01 | 100.0% | 67.9% |
| 3596486 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.59 | 52.0 | 3.64e-01 | 100.0% | 41.3% |
| 3669764 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 52.0 | 3.53e-01 | 100.0% | 43.4% |
| 3614882 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 53.0 | 3.72e-01 | 100.0% | 48.5% |
| 3462640 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 51.0 | 2.87e-01 | 100.0% | 11.0% |
| 3631350 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 45.0 | 4.43e-01 | 100.0% | 76.0% |
| 4004212 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 52.0 | 3.76e-01 | 100.0% | 50.0% |
| 3317877 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 50.0 | 4.00e-01 | 96.7% | 48.2% |
| 3553717 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.59 | 52.0 | 3.63e-01 | 100.0% | 44.8% |
| 3272342 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 52.0 | 3.67e-01 | 100.0% | 44.4% |
| 3630348 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 52.0 | 2.98e-01 | 100.0% | 13.8% |
| 3614305 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.58 | 51.0 | 3.40e-01 | 100.0% | 34.7% |
| 4139990 | 304.11.1.2 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT | 0.58 | 43.0 | 4.47e-01 | 97.8% | 83.5% |
| 4234725 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.58 | 44.0 | 4.44e-01 | 94.6% | 80.0% |
| 4854269 | 304.4.1.7 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Cyclase_polyket | 0.58 | 44.0 | 4.32e-01 | 95.7% | 73.1% |
| 4934427 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.58 | 40.0 | 3.89e-01 | 70.7% | 70.0% |
| 4934933 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.58 | 51.0 | 3.88e-01 | 100.0% | 85.3% |
| 3658490 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 50.0 | 3.92e-01 | 100.0% | 66.0% |
| 3688261 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 43.0 | 4.22e-01 | 94.6% | 74.0% |
| 3180087 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 51.0 | 3.52e-01 | 100.0% | 40.3% |
| 3619557 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 44.0 | 4.14e-01 | 81.5% | 90.0% |
| 4928084 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.57 | 44.0 | 4.39e-01 | 93.5% | 81.1% |
| 3276016 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 51.0 | 3.43e-01 | 100.0% | 45.8% |
| 3693170 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 37.0 | 4.04e-01 | 93.5% | 82.7% |
| 3647322 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 47.0 | 3.98e-01 | 94.6% | 84.4% |
| 3738021 | 304.8.1.105 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF30953 | 0.56 | 42.0 | 3.85e-01 | 94.6% | 60.8% |
| 3595977 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 42.0 | 4.30e-01 | 94.6% | 84.4% |
| 3424312 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.56 | 49.0 | 3.52e-01 | 100.0% | 38.4% |
| 4591683 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.56 | 47.0 | 4.71e-01 | 95.7% | 90.5% |
| 3669930 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 43.0 | 4.46e-01 | 100.0% | 91.8% |
| 3932922 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 49.0 | 3.44e-01 | 98.9% | 51.8% |
| 3647228 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 46.0 | 4.04e-01 | 95.7% | 90.7% |
| 4026995 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 45.0 | 4.33e-01 | 96.7% | 78.1% |
| 3990670 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 46.0 | 4.35e-01 | 96.7% | 80.0% |
| 3887323 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 42.0 | 3.89e-01 | 96.7% | 63.2% |
| 3187311 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 43.0 | 4.26e-01 | 96.7% | 82.0% |
| 5055367 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.53 | 39.0 | 3.94e-01 | 78.3% | 80.0% |
| 3460420 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.53 | 44.0 | 4.22e-01 | 94.6% | 80.0% |
| 4026822 | 304.9.1.13 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › GUCT | 0.53 | 44.0 | 4.27e-01 | 93.5% | 83.8% |
| 3937461 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.53 | 44.0 | 4.20e-01 | 94.6% | 83.6% |
| 3405420 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 43.0 | 3.73e-01 | 97.8% | 56.0% |
| 3500837 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 46.0 | 4.12e-01 | 100.0% | 83.0% |
| 4019320 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 44.0 | 4.36e-01 | 95.7% | 91.0% |
| 4024337 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 43.0 | 4.11e-01 | 96.7% | 78.2% |
| 3279592 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.52 | 42.0 | 3.79e-01 | 90.2% | 94.6% |
| 3434217 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.51 | 31.0 | 3.23e-01 | 100.0% | 64.7% |
| 3284008 | 304.4.1.57 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 | 0.50 | 39.0 | 3.80e-01 | 94.6% | 75.2% |