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DNApol

Euk-Vir

Spodoptera_frugiperda_granulovirus

DNApol__YP_009121894__Spodoptera_frugiperda_granulovirus__307454

Identity

Accession:
YP_009121894 ↗
Protein ID:
DNApol
Kingdom:
euk

Quality

83.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

Cluster

View cluster (158 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 209-434
PDB
Domain cluster: rep: DNA_polymerase__YP_009118564__Condylorrhiza_vestigialis_MNPV__1592576__D196-404
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 79.0 5.10e-22 79.2% 73.1%
PF10108.16 DNA_pol_B_exo2 48.4 1.30e-12 74.8% 61.3%
PF13482.13 RNase_H_2 23.2 8.10e-05 74.3% 56.4%
D2 medium residues 42-207
PDB
Domain cluster: rep: DNA_polymerase__YP_010084862__Shrimp_hemocyte_iridescent_virus__2039780__D2-200
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 25.0 4.94e-01 71.7% 100.0%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 26.0 4.34e-01 75.3% 78.1%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 23.0 4.74e-01 71.7% 100.0%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.79 24.0 4.32e-01 75.3% 82.8%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 23.0 4.63e-01 71.1% 100.0%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.77 27.0 4.66e-01 84.9% 93.1%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 25.0 4.15e-01 74.1% 80.3%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 27.0 4.21e-01 76.5% 77.5%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.74 28.0 4.50e-01 75.9% 88.1%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.73 28.0 4.45e-01 76.5% 89.6%
3q8dA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 34.0 4.90e-01 86.7% 97.4%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.70 19.0 3.34e-01 78.9% 69.6%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.70 18.0 3.41e-01 79.5% 74.5%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.70 19.0 3.09e-01 78.9% 60.9%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 36.0 4.76e-01 89.8% 91.2%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.69 18.0 3.33e-01 78.3% 73.1%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.69 18.0 3.35e-01 79.5% 73.1%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 40.0 4.81e-01 94.6% 84.5%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 31.0 4.28e-01 87.3% 87.5%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 34.0 4.77e-01 91.0% 100.0%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 19.0 3.14e-01 77.7% 67.8%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 34.0 4.67e-01 88.6% 95.5%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 36.0 4.68e-01 92.8% 95.7%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 37.0 4.27e-01 92.8% 75.6%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 38.0 4.38e-01 92.8% 78.7%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 18.0 3.17e-01 78.9% 76.5%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 38.0 4.47e-01 91.6% 85.3%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 27.0 4.29e-01 77.1% 100.0%
1lm0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 33.0 4.15e-01 91.0% 84.2%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 34.0 4.43e-01 89.8% 93.8%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 19.0 3.31e-01 78.9% 82.1%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 38.0 4.23e-01 93.4% 77.2%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.59 25.0 2.87e-01 89.2% 51.6%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 35.0 3.84e-01 91.0% 70.2%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 24.0 3.00e-01 89.8% 58.8%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.59 21.0 3.17e-01 83.1% 74.3%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 4.49e-01 93.4% 89.1%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 37.0 4.03e-01 91.0% 78.3%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 36.0 3.75e-01 90.4% 69.4%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 30.0 3.73e-01 89.2% 84.9%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.54 33.0 3.67e-01 88.0% 76.1%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 27.0 3.73e-01 74.1% 93.3%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 27.0 3.68e-01 74.7% 91.3%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 28.0 3.70e-01 75.3% 91.5%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 30.0 3.81e-01 87.3% 94.8%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 4.12e-01 94.0% 87.3%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 27.0 3.70e-01 74.7% 94.4%
3a35A01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 26.0 3.55e-01 74.1% 89.1%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 27.0 3.45e-01 74.7% 84.2%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 34.0 3.63e-01 91.0% 79.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4052370 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 32.0 5.17e-01 88.0% 100.0%
3969569 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.77 26.0 4.48e-01 83.1% 88.3%
3226147 2.1.1.44 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.75 35.0 4.93e-01 86.7% 89.4%
4262785 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.74 36.0 5.21e-01 88.6% 98.8%
4211209 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.73 26.0 4.24e-01 83.7% 84.6%
4277745 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.72 35.0 4.97e-01 88.0% 96.2%
419 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 29.0 4.26e-01 77.7% 81.6%
3389015 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 33.0 4.33e-01 84.3% 75.0%
4942400 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 34.0 3.92e-01 88.0% 60.8%
3933293 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 23.0 3.89e-01 87.3% 84.5%
4270702 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.69 34.0 4.80e-01 87.3% 97.5%
3826195 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.69 38.0 4.81e-01 90.4% 89.0%
5023017 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 57.0 5.24e-01 88.0% 74.4%
3705696 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.68 59.0 5.27e-01 92.2% 84.8%
4504110 2484.1.1.197 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 0.68 58.0 4.25e-01 90.4% 40.5%
5023276 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 33.0 4.59e-01 87.3% 94.1%
3236144 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 41.0 4.94e-01 94.0% 92.7%
4949765 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 54.0 5.46e-01 86.7% 87.3%
3239000 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 39.0 4.38e-01 94.0% 76.9%
3172086 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 36.0 4.29e-01 91.6% 80.0%
4236717 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 31.0 3.60e-01 79.5% 64.2%
3527706 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 39.0 4.31e-01 92.8% 74.8%
3967128 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 27.0 4.39e-01 81.9% 100.0%
5026267 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.63 27.0 4.07e-01 80.1% 90.7%
4366434 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.63 27.0 4.18e-01 78.9% 95.7%
5026716 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 36.0 4.34e-01 90.4% 83.6%
3342201 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.62 39.0 4.65e-01 94.0% 90.4%
3501852 2.1.1.47 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BRCA-2_OB3 0.62 40.0 4.71e-01 94.0% 92.2%
3512889 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 38.0 4.19e-01 92.8% 74.8%
4992039 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.62 27.0 4.04e-01 80.7% 93.2%
3964664 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.61 25.0 3.89e-01 77.1% 94.1%
3943796 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.60 29.0 4.16e-01 78.3% 96.2%
3830803 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 33.0 4.19e-01 84.9% 87.6%
4990974 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 29.0 4.08e-01 80.7% 92.9%
3737319 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.60 38.0 4.12e-01 93.4% 74.5%
3490309 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 38.0 4.17e-01 93.4% 78.5%
4451383 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 35.0 3.76e-01 90.4% 67.6%
3963148 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 34.0 4.35e-01 88.6% 96.0%
3593304 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 36.0 4.13e-01 90.4% 82.4%
4341423 2.1.1.279 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4131 0.58 37.0 4.28e-01 92.2% 88.3%
3248985 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 40.0 4.49e-01 93.4% 91.5%
4675814 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.58 49.0 3.73e-01 92.2% 41.7%
3783321 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 34.0 3.74e-01 90.4% 72.1%
4079889 3454.1.1.7 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PF28060 0.56 21.0 3.43e-01 83.1% 90.8%
4468760 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.55 47.0 3.77e-01 92.2% 47.1%
4237578 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 27.0 3.18e-01 78.9% 64.2%
3948546 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 31.0 4.01e-01 80.7% 94.0%
4443040 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 31.0 3.89e-01 80.1% 90.4%
3386643 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.53 27.0 3.48e-01 74.7% 81.0%
4667220 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 43.0 4.13e-01 95.2% 76.2%
3738104 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.52 36.0 3.65e-01 92.8% 69.7%
11143 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.52 39.0 2.98e-01 77.1% 65.3%
3720761 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.52 42.0 3.40e-01 86.1% 95.2%
4022461 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.51 39.0 3.64e-01 94.0% 63.4%
4960303 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 26.0 3.43e-01 88.0% 87.4%
4026991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 37.0 4.07e-01 90.4% 91.8%
3712832 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 36.0 3.67e-01 95.2% 74.5%
D3 medium residues 477-540_565-668
PDB
Domain cluster: rep: DNA_polymerase__YP_010086932__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D494-537_560-649
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 38.3 1.00e-09 51.8% 17.7%
D4 medium residues 541-564_669-777
PDB
Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_009552191__Malacosoma_neustria_nucleopolyhedrovirus__38012__D557-567_668-765
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 39.6 4.10e-10 86.5% 20.1%
D5 medium residues 825-901
PDB
Domain cluster: rep: DNA_polymerase__YP_009513145__Agrotis_segetum_granulovirus__10464__D860-955