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DQ121662.1__AAZ29328.1__JK_78__00078
Bact-VirDQ121662.1__AAZ29328.1__JK_78__00078
Identity
- Accession:
- DQ121662 ↗
- Kingdom:
- phage
Quality
73.3
mean pLDDT
Taxonomy
TaxID: 2886922
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-64
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.82 | 72.0 | 5.77e-01 | 100.0% | 66.0% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.82 | 68.0 | 6.10e-01 | 92.5% | 74.0% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.82 | 60.0 | 4.44e-01 | 79.2% | 31.6% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.80 | 59.0 | 5.09e-01 | 79.2% | 66.7% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.76 | 55.0 | 4.89e-01 | 77.4% | 53.9% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.75 | 56.0 | 5.28e-01 | 81.1% | 85.9% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 64.0 | 5.25e-01 | 100.0% | 93.1% |
| 1yz5B00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.74 | 62.0 | 4.10e-01 | 96.2% | 51.5% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 63.0 | 5.97e-01 | 96.2% | 95.2% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.74 | 64.0 | 5.45e-01 | 98.1% | 92.0% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 63.0 | 4.47e-01 | 100.0% | 76.9% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.73 | 54.0 | 4.44e-01 | 81.1% | 47.4% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.72 | 53.0 | 4.91e-01 | 81.1% | 60.6% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 62.0 | 4.60e-01 | 100.0% | 89.0% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.72 | 54.0 | 5.49e-01 | 81.1% | 86.3% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 61.0 | 4.53e-01 | 96.2% | 91.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 51.0 | 4.23e-01 | 77.4% | 44.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 62.0 | 4.54e-01 | 100.0% | 90.6% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.71 | 61.0 | 3.83e-01 | 100.0% | 19.8% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 62.0 | 4.54e-01 | 100.0% | 93.2% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.71 | 59.0 | 4.31e-01 | 98.1% | 36.5% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 61.0 | 4.26e-01 | 100.0% | 81.6% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.71 | 62.0 | 5.33e-01 | 100.0% | 89.3% |
| 2pybA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 61.0 | 4.46e-01 | 100.0% | 92.7% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.69 | 56.0 | 3.93e-01 | 92.5% | 31.5% |
| 2fjcB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 60.0 | 4.35e-01 | 100.0% | 89.1% |
| 1kz7A01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.69 | 60.0 | 4.11e-01 | 100.0% | 53.4% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.69 | 50.0 | 4.24e-01 | 79.2% | 46.7% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 59.0 | 4.36e-01 | 100.0% | 96.5% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.66 | 56.0 | 4.42e-01 | 98.1% | 51.7% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.66 | 55.0 | 4.55e-01 | 100.0% | 58.5% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 57.0 | 4.15e-01 | 100.0% | 91.3% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.65 | 48.0 | 5.09e-01 | 83.0% | 95.6% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 49.0 | 4.00e-01 | 88.7% | 65.2% |
| 1ze0A01 | 1.20.120.700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nitrate reductase, subunit delta (NarJ) | 0.62 | 48.0 | 4.19e-01 | 92.5% | 53.6% |
| 4aezI01 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 51.0 | 3.58e-01 | 96.2% | 31.5% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 48.0 | 3.27e-01 | 90.6% | 43.5% |
| 4a8eA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.60 | 51.0 | 4.41e-01 | 98.1% | 64.4% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 47.0 | 4.21e-01 | 98.1% | 84.6% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975674 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.90 | 82.0 | 6.32e-01 | 100.0% | 50.9% |
| 3231844 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.89 | 61.0 | 4.73e-01 | 79.2% | 36.2% |
| 3646532 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.87 | 75.0 | 4.78e-01 | 92.5% | 21.3% |
| 3810677 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.87 | 74.0 | 5.01e-01 | 92.5% | 28.0% |
| 3732909 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.86 | 76.0 | 6.59e-01 | 98.1% | 96.2% |
| 3225097 | 109.4.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C | 0.83 | 70.0 | 4.21e-01 | 100.0% | 14.7% |
| 3669330 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.81 | 72.0 | 6.16e-01 | 100.0% | 91.8% |
| 3515847 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.81 | 59.0 | 4.80e-01 | 77.4% | 45.3% |
| 3312910 | 603.1.1.111 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N | 0.81 | 59.0 | 4.96e-01 | 79.2% | 47.8% |
| 3704699 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.81 | 72.0 | 5.90e-01 | 100.0% | 91.6% |
| 4977335 | 604.12.1.139 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF1844 | 0.80 | 69.0 | 5.99e-01 | 98.1% | 91.6% |
| 3800231 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.79 | 70.0 | 4.11e-01 | 100.0% | 51.2% |
| 3667701 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.79 | 70.0 | 4.30e-01 | 98.1% | 26.0% |
| 3666571 | 109.4.1.1993 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif, TPR_24 | 0.79 | 71.0 | 3.97e-01 | 100.0% | 13.3% |
| 3321993 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.79 | 70.0 | 5.37e-01 | 98.1% | 68.7% |
| 4019868 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 68.0 | 4.18e-01 | 100.0% | 17.9% |
| 3433875 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.79 | 72.0 | 5.02e-01 | 100.0% | 49.0% |
| 4441814 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.78 | 65.0 | 6.48e-01 | 92.5% | 94.5% |
| 4995391 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.78 | 67.0 | 5.65e-01 | 98.1% | 84.4% |
| 3650245 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.78 | 68.0 | 4.87e-01 | 98.1% | 54.0% |
| 3588370 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.77 | 65.0 | 4.87e-01 | 92.5% | 71.2% |
| 3189527 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.77 | 56.0 | 5.21e-01 | 77.4% | 93.8% |
| 3434454 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.77 | 67.0 | 4.45e-01 | 98.1% | 37.1% |
| 4047162 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.76 | 61.0 | 6.23e-01 | 86.8% | 98.0% |
| 3829818 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 66.0 | 5.07e-01 | 100.0% | 43.3% |
| 3280086 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.75 | 60.0 | 4.07e-01 | 100.0% | 25.6% |
| 3275886 | 109.4.1.1126 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_SYO1 | 0.73 | 62.0 | 4.10e-01 | 100.0% | 31.7% |
| 4209872 | 109.4.1.3453 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30334, PF30337 | 0.73 | 62.0 | 3.40e-01 | 98.1% | 5.8% |
| 5055566 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 62.0 | 4.91e-01 | 100.0% | 84.3% |
| 3984303 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 59.0 | 4.35e-01 | 100.0% | 33.8% |
| 3096672 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 62.0 | 4.45e-01 | 100.0% | 80.2% |
| 4474302 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.72 | 59.0 | 4.30e-01 | 94.3% | 36.8% |
| 4934784 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.71 | 51.0 | 4.48e-01 | 81.1% | 49.4% |
| 5050356 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 54.0 | 4.93e-01 | 83.0% | 65.7% |
| 3452875 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 59.0 | 4.10e-01 | 100.0% | 44.7% |
| 4608200 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 59.0 | 4.57e-01 | 100.0% | 95.2% |
| 3524904 | 109.4.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C | 0.69 | 60.0 | 3.69e-01 | 100.0% | 16.3% |
| 4216957 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.69 | 61.0 | 4.20e-01 | 100.0% | 31.1% |
| 3803180 | 109.4.1.1292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 | 0.68 | 57.0 | 3.36e-01 | 98.1% | 18.2% |
| 3543076 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.66 | 57.0 | 3.88e-01 | 100.0% | 84.0% |
| 3700975 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 52.0 | 3.16e-01 | 100.0% | 11.8% |
| 3767618 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.63 | 54.0 | 4.18e-01 | 100.0% | 77.6% |
| 3708851 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.63 | 51.0 | 4.87e-01 | 98.1% | 76.9% |
| 3925923 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.61 | 48.0 | 4.38e-01 | 100.0% | 65.7% |
| 3188397 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 46.0 | 3.72e-01 | 92.5% | 96.5% |
| 4015114 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.58 | 50.0 | 4.13e-01 | 100.0% | 69.0% |