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DQ340064.2__ABC61292.1__X__00037

Bact-Vir

DQ340064.2__ABC61292.1__X__00037

Identity

Accession:
DQ340064 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Svunavirus› Geobacillus_phage_GBSV1

TaxID: 365048

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11213.14 best DUF3006 71.4 8.60e-20 92.7% 100.0%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.96 91.0 8.89e-01 100.0% 94.5%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.81 55.0 5.50e-01 70.6% 85.9%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 52.0 4.39e-01 72.1% 48.7%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 53.0 5.32e-01 73.5% 95.7%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 51.0 5.51e-01 70.6% 87.9%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.71 54.0 5.15e-01 80.9% 92.3%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 58.0 5.39e-01 98.5% 89.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018098 2.14.1.6 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 0.89 82.0 7.91e-01 100.0% 94.7%
4975151 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.87 59.0 6.59e-01 70.6% 90.9%
4987937 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.84 54.0 4.28e-01 70.6% 35.2%
4236900 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.84 54.0 4.29e-01 70.6% 34.9%
4944219 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.83 52.0 4.21e-01 70.6% 35.2%
4990774 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.83 54.0 4.55e-01 72.1% 41.8%
5026953 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.81 56.0 4.53e-01 70.6% 44.2%
4982895 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.81 55.0 4.37e-01 70.6% 39.2%
1099004 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.80 50.0 5.48e-01 70.6% 78.2%
4951338 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.80 50.0 4.06e-01 70.6% 35.8%
4582543 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.79 54.0 4.79e-01 70.6% 71.6%
4934734 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.79 52.0 4.11e-01 70.6% 34.3%
4206084 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.78 56.0 4.23e-01 75.0% 60.0%
4153967 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.76 52.0 4.33e-01 70.6% 73.5%
4994830 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.76 51.0 4.29e-01 70.6% 73.9%
4027432 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.75 55.0 4.59e-01 77.9% 88.7%
3281927 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.74 51.0 4.11e-01 70.6% 40.8%
3485636 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 56.0 5.05e-01 79.4% 84.4%
4962104 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.74 49.0 3.91e-01 70.6% 35.4%
5072770 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 52.0 5.17e-01 75.0% 90.0%
4985754 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 54.0 4.79e-01 82.4% 75.8%
1698227 2.1.1.103 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PHA02142 0.67 47.0 5.03e-01 73.5% 89.8%
3552666 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.54 41.0 3.03e-01 83.8% 47.6%
5022458 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.50 35.0 2.89e-01 75.0% 66.9%