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DQ372923.1__ABD94190.1__X__00025
Bact-VirDQ372923.1__ABD94190.1__X__00025
Identity
- Accession:
- DQ372923 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-76
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 29.0 | 3.02e-01 | 98.7% | 52.1% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.53 | 37.0 | 3.51e-01 | 88.2% | 58.9% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 34.0 | 2.55e-01 | 100.0% | 24.1% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.53 | 34.0 | 3.52e-01 | 78.9% | 70.0% |
| 2uv4A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 41.0 | 3.46e-01 | 89.5% | 93.0% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 37.0 | 3.93e-01 | 90.8% | 85.3% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 33.0 | 3.65e-01 | 78.9% | 83.1% |
| 3hf7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 40.0 | 3.54e-01 | 92.1% | 99.2% |
| 3kh5A02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 38.0 | 3.26e-01 | 84.2% | 97.8% |
| 2yzqA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 35.0 | 3.08e-01 | 73.7% | 77.6% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 36.0 | 3.26e-01 | 76.3% | 87.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3466252 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 35.0 | 2.08e-01 | 72.4% | 8.4% |
| 3277516 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.55 | 38.0 | 3.11e-01 | 73.7% | 66.5% |
| 5016418 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 38.0 | 3.04e-01 | 73.7% | 72.8% |
| 3707421 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.53 | 45.0 | 3.15e-01 | 94.7% | 28.1% |
| 3581305 | 604.12.1.92 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Meckelin | 0.53 | 43.0 | 3.13e-01 | 89.5% | 34.6% |
| 5013111 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.52 | 44.0 | 3.05e-01 | 94.7% | 26.7% |
| 3281464 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.52 | 45.0 | 3.15e-01 | 100.0% | 73.8% |
| 4948625 | 2002.1.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large | 0.51 | 36.0 | 2.31e-01 | 73.7% | 61.3% |
| 3451631 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.51 | 38.0 | 3.91e-01 | 84.2% | 85.7% |
| 4929471 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 2.97e-01 | 85.5% | 80.5% |
| 4948416 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 37.0 | 3.03e-01 | 77.6% | 76.8% |
| 3941757 | 101.1.9.32 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT | 0.50 | 39.0 | 3.33e-01 | 86.8% | 57.7% |
| 5006512 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.50 | 33.0 | 3.62e-01 | 89.5% | 85.0% |
D2
medium
residues 77-130
Domain cluster:
representative