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DQ372923.1__ABD94199.1__X__00034
Bact-VirDQ372923.1__ABD94199.1__X__00034
Identity
- Accession:
- DQ372923 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-114
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3igmA00 | 1.20.5.2050 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 32.0 | 4.23e-01 | 97.1% | 85.7% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.58 | 35.0 | 3.66e-01 | 84.6% | 63.6% |
| 1o70A01 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.56 | 41.0 | 3.80e-01 | 77.9% | 79.3% |
| 4h3sA03 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.56 | 43.0 | 4.23e-01 | 83.7% | 100.0% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 33.0 | 3.35e-01 | 78.8% | 62.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071089 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 34.0 | 4.75e-01 | 74.0% | 100.0% |
| 4343568 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.62 | 37.0 | 4.26e-01 | 72.1% | 85.7% |
| 5073026 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 32.0 | 4.13e-01 | 75.0% | 100.0% |
| 4027686 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.61 | 28.0 | 3.83e-01 | 82.7% | 83.6% |
| 4991056 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.59 | 31.0 | 4.02e-01 | 78.8% | 94.5% |
| 4028716 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.58 | 29.0 | 2.73e-01 | 78.8% | 34.8% |
| 3519410 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 25.0 | 3.60e-01 | 75.0% | 100.0% |
| 223688 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 26.0 | 3.54e-01 | 71.2% | 97.8% |
| 4080304 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.55 | 40.0 | 4.27e-01 | 80.8% | 90.0% |
| 5009170 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 26.0 | 3.01e-01 | 72.1% | 60.0% |
| 3599783 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.54 | 43.0 | 4.36e-01 | 86.5% | 88.0% |
| 4978284 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 36.0 | 3.48e-01 | 76.0% | 59.2% |
| 3649918 | 11.1.1.389 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C | 0.54 | 44.0 | 3.38e-01 | 88.5% | 65.4% |
| 3395219 | 4312.2.1.1 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C | 0.53 | 36.0 | 4.04e-01 | 72.1% | 97.3% |
| 5073431 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.52 | 44.0 | 2.79e-01 | 91.3% | 40.4% |
| 4030356 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.51 | 45.0 | 3.56e-01 | 98.1% | 79.4% |
| 3741268 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 38.0 | 3.21e-01 | 78.8% | 70.3% |
| 4028791 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.50 | 26.0 | 3.60e-01 | 78.8% | 98.2% |