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DQ490912.1__ABF57706.1__X__00001

Bact-Vir

DQ490912.1__ABF57706.1__X__00001

Identity

Accession:
DQ490912 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-145
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22639.2 best Gp18_dom_I 108.1 2.60e-31 96.8% 100.0%
D2 medium residues 1-50
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22671.2 best Gp18_domIII_N 32.2 1.60e-07 78.0% 60.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mjtB01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.63 51.0 3.87e-01 94.0% 55.0%
5ffdA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 42.0 3.27e-01 100.0% 94.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4981275 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 47.0 3.26e-01 74.0% 75.3%
4992536 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 45.0 2.75e-01 78.0% 24.9%
5029698 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.61 42.0 2.88e-01 72.0% 71.7%
2048178 244.2.1.10 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › NDH2_C 0.55 38.0 3.46e-01 72.0% 81.8%