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DQ500118.1__ABF71328.1__RM163_074__00074

Bact-Vir

DQ500118.1__ABF71328.1__RM163_074__00074

Identity

Accession:
DQ500118 ↗
Kingdom:
phage

Quality

70.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-56
PDB
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.93 85.0 7.63e-01 100.0% 89.4%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.92 84.0 7.85e-01 100.0% 95.0%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.92 84.0 7.73e-01 100.0% 93.4%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.91 83.0 7.01e-01 100.0% 71.8%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.90 83.0 6.44e-01 100.0% 55.1%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.90 82.0 7.70e-01 100.0% 94.9%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.90 81.0 7.13e-01 100.0% 80.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.89 82.0 7.16e-01 100.0% 80.0%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.89 81.0 6.43e-01 100.0% 61.3%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 80.0 6.54e-01 100.0% 62.8%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 80.0 7.73e-01 100.0% 98.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 80.0 7.61e-01 100.0% 94.7%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 79.0 7.41e-01 100.0% 91.7%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 80.0 7.52e-01 100.0% 98.3%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 80.0 7.21e-01 100.0% 83.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.87 80.0 7.13e-01 100.0% 84.8%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.87 78.0 7.23e-01 100.0% 93.4%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.87 77.0 7.62e-01 100.0% 94.1%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 77.0 6.95e-01 100.0% 98.5%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 78.0 7.40e-01 100.0% 98.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 78.0 7.18e-01 100.0% 90.3%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 77.0 7.27e-01 100.0% 96.6%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 79.0 7.12e-01 100.0% 76.6%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 77.0 6.96e-01 100.0% 90.9%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 77.0 7.16e-01 100.0% 90.0%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.85 62.0 4.18e-01 77.6% 64.5%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 76.0 6.94e-01 100.0% 92.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 76.0 6.80e-01 100.0% 91.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 75.0 7.30e-01 100.0% 94.3%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 73.0 6.00e-01 100.0% 55.3%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 74.0 6.87e-01 100.0% 90.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 72.0 7.30e-01 95.9% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 67.0 6.00e-01 100.0% 63.8%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 70.0 6.65e-01 93.9% 100.0%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 74.0 6.88e-01 100.0% 90.2%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 71.0 5.87e-01 100.0% 58.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 64.0 6.50e-01 100.0% 91.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 68.0 6.10e-01 100.0% 69.1%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 69.0 6.78e-01 100.0% 98.1%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.17e-01 100.0% 68.1%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 66.0 6.00e-01 100.0% 69.7%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.18e-01 100.0% 69.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.15e-01 100.0% 88.2%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 71.0 6.25e-01 100.0% 72.9%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 63.0 5.17e-01 93.9% 65.6%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.00e-01 98.0% 80.0%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 6.02e-01 100.0% 73.0%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 5.77e-01 100.0% 74.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 62.0 6.09e-01 100.0% 84.9%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.76 68.0 6.23e-01 100.0% 88.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 6.14e-01 100.0% 83.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.31e-01 100.0% 66.3%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 4.59e-01 85.7% 54.9%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 60.0 5.38e-01 89.8% 92.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.88e-01 100.0% 79.0%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 61.0 6.09e-01 100.0% 98.0%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 59.0 4.93e-01 89.8% 85.0%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.71 55.0 5.78e-01 93.9% 97.7%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.70e-01 100.0% 85.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.54e-01 98.0% 79.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.66e-01 100.0% 95.7%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 40.0 3.72e-01 89.8% 45.2%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 57.0 4.85e-01 91.8% 84.8%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 47.0 4.17e-01 73.5% 49.3%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 54.0 5.42e-01 100.0% 88.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 5.18e-01 100.0% 84.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.25e-01 100.0% 77.4%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 5.35e-01 100.0% 81.0%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.90e-01 100.0% 70.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.66 55.0 5.08e-01 100.0% 72.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.89e-01 100.0% 68.8%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.29e-01 100.0% 87.3%
1oqkA00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.63 51.0 4.51e-01 100.0% 61.5%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 43.0 3.99e-01 73.5% 93.8%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.62 54.0 3.57e-01 100.0% 47.1%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 53.0 4.12e-01 98.0% 95.2%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.33e-01 95.9% 49.8%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 53.0 4.22e-01 100.0% 95.8%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 47.0 3.09e-01 93.9% 52.9%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 3.06e-01 93.9% 70.1%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 2.77e-01 93.9% 40.0%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.07e-01 95.9% 60.3%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 2.92e-01 100.0% 46.7%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.55 48.0 2.82e-01 100.0% 23.5%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.55 41.0 2.98e-01 83.7% 51.3%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.55 43.0 3.10e-01 89.8% 57.1%
1xqaA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 44.0 3.45e-01 91.8% 78.2%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.55 44.0 3.43e-01 91.8% 62.7%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.55 44.0 3.84e-01 93.9% 64.6%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.54 40.0 3.83e-01 87.8% 69.0%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 43.0 3.83e-01 93.9% 81.3%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 2.60e-01 98.0% 33.0%
2vz8A04 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 41.0 2.68e-01 93.9% 67.3%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.50 31.0 2.32e-01 95.9% 21.6%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3899828 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.95 89.0 7.35e-01 100.0% 68.8%
3619599 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.95 88.0 7.49e-01 100.0% 73.3%
3554995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.95 88.0 7.66e-01 100.0% 78.6%
3842062 4.1.1.91 beta barrels › SH3 › SH3 › SH3 › hSH3 0.95 88.0 6.74e-01 100.0% 57.0%
3907870 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.94 88.0 7.31e-01 100.0% 69.6%
4134876 4.1.1.334 beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.94 88.0 5.84e-01 100.0% 33.3%
3999508 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.94 88.0 7.65e-01 100.0% 84.3%
3514453 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.94 86.0 7.35e-01 100.0% 73.3%
3924338 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.94 87.0 7.57e-01 100.0% 78.6%
3702915 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.93 87.0 8.03e-01 100.0% 91.7%
3496355 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.93 84.0 8.01e-01 95.9% 96.4%
3494765 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.93 86.0 5.42e-01 100.0% 25.0%
3621642 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.93 86.0 7.17e-01 100.0% 68.8%
3513923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.93 86.0 7.29e-01 100.0% 73.3%
3498145 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.93 86.0 7.76e-01 100.0% 85.9%
3503771 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.93 86.0 7.70e-01 100.0% 86.2%
3572393 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.93 86.0 7.48e-01 100.0% 74.3%
3491137 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.92 86.0 7.94e-01 100.0% 91.7%
3413864 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.92 85.0 5.70e-01 100.0% 33.3%
3626531 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.92 85.0 6.79e-01 100.0% 61.1%
3573262 4.1.1.91 beta barrels › SH3 › SH3 › SH3 › hSH3 0.92 86.0 6.82e-01 100.0% 61.1%
3479350 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.92 85.0 6.92e-01 100.0% 64.7%
3902139 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.92 85.0 7.41e-01 100.0% 74.3%
3487936 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.92 84.0 7.38e-01 100.0% 78.6%
3554293 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.92 85.0 7.59e-01 100.0% 86.2%
3415045 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.91 84.0 7.33e-01 100.0% 78.6%
4537356 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.91 79.0 7.37e-01 93.9% 98.3%
3893368 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.91 85.0 7.63e-01 100.0% 80.0%
3918340 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.91 84.0 7.31e-01 100.0% 81.4%
3256431 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.91 76.0 6.32e-01 98.0% 55.0%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.91 84.0 6.10e-01 100.0% 50.8%
3234947 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.91 83.0 7.48e-01 100.0% 86.2%
3224441 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 83.0 7.37e-01 100.0% 79.4%
3873942 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 81.0 7.31e-01 98.0% 86.2%
3900733 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.90 82.0 7.23e-01 100.0% 80.0%
4473115 4.1.1.5 beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.90 77.0 5.95e-01 100.0% 45.0%
3246255 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.90 82.0 7.20e-01 100.0% 78.6%
3600486 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 82.0 6.35e-01 100.0% 55.0%
3224981 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.89 81.0 7.53e-01 100.0% 91.7%
4038705 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.89 81.0 7.35e-01 100.0% 95.4%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.89 81.0 5.40e-01 100.0% 29.1%
3879164 4.1.1.91 beta barrels › SH3 › SH3 › SH3 › hSH3 0.89 80.0 6.90e-01 100.0% 76.0%
3521739 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.89 81.0 6.61e-01 100.0% 64.7%
1032191 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.89 75.0 6.37e-01 100.0% 58.4%
4127826 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.88 80.0 7.27e-01 100.0% 95.4%
3930456 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 79.0 7.19e-01 100.0% 78.5%
3505111 4.1.1.318 beta barrels › SH3 › SH3 › SH3 › PF26085 0.88 80.0 6.38e-01 100.0% 60.2%
3995675 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.88 80.0 7.43e-01 100.0% 95.0%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.88 80.0 5.94e-01 100.0% 44.3%
3774821 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 80.0 7.42e-01 100.0% 85.0%
3636812 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.87 79.0 7.11e-01 100.0% 84.6%
4024411 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 66.0 6.33e-01 100.0% 72.7%
3372822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 79.0 6.74e-01 100.0% 73.3%
3245032 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 78.0 6.69e-01 100.0% 88.0%
3899589 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 74.0 6.94e-01 95.9% 91.7%
162525 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 76.0 5.96e-01 100.0% 53.9%
2831843 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 72.0 5.49e-01 100.0% 43.3%
3621818 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.85 70.0 6.96e-01 100.0% 88.0%
3993250 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.85 69.0 6.69e-01 100.0% 80.0%
3231177 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.84 68.0 6.85e-01 98.0% 88.0%
3523979 604.12.1.118 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.83 71.0 6.63e-01 100.0% 76.7%
3304602 4.1.1.427 beta barrels › SH3 › SH3 › SH3 › F-box 0.83 68.0 5.43e-01 100.0% 46.3%
3855972 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.83 70.0 6.39e-01 100.0% 70.8%
4271974 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.83 76.0 6.86e-01 100.0% 76.6%
3797642 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 70.0 4.66e-01 100.0% 24.9%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 75.0 6.80e-01 100.0% 76.9%
3868320 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.82 70.0 6.34e-01 100.0% 70.8%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 75.0 6.74e-01 100.0% 75.4%
3929260 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 73.0 7.07e-01 100.0% 87.3%
3502290 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 6.61e-01 100.0% 78.3%
3622389 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 68.0 6.25e-01 100.0% 70.8%
3397846 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 67.0 6.46e-01 100.0% 81.8%
3510676 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.54e-01 100.0% 49.5%
3920026 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.80 66.0 4.31e-01 100.0% 21.4%
3200493 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.80 66.0 6.37e-01 98.0% 80.0%
1263713 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.80 66.0 6.55e-01 100.0% 86.5%
4300449 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.80 72.0 6.52e-01 100.0% 76.9%
4218142 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.80 67.0 5.22e-01 100.0% 45.0%
3660964 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.80 72.0 5.60e-01 100.0% 49.0%
4888987 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.79 71.0 6.30e-01 100.0% 71.0%
3698762 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.79 70.0 5.47e-01 100.0% 47.6%
3597255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 70.0 5.82e-01 100.0% 57.6%
4091771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.70e-01 100.0% 85.0%
3373330 4.1.1.337 beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.79 67.0 5.77e-01 100.0% 61.3%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.79 71.0 6.85e-01 100.0% 90.9%
3464886 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.79 71.0 6.64e-01 100.0% 85.0%
3533318 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.79 65.0 6.53e-01 100.0% 90.0%
403788 4.1.1.100 beta barrels › SH3 › SH3 › SH3 › SH3_11 0.78 70.0 6.44e-01 100.0% 81.0%
3937333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 71.0 5.92e-01 100.0% 62.5%
1068760 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.76 62.0 5.36e-01 100.0% 57.7%
4003717 4.1.1.50 beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.75 65.0 5.73e-01 100.0% 73.3%
3781209 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.75 66.0 5.24e-01 100.0% 52.0%
3472332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.00e-01 100.0% 83.6%
3936726 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.43e-01 100.0% 89.1%
5063311 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.74 58.0 6.01e-01 98.0% 97.8%
3241817 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.07e-01 100.0% 81.7%
3930643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.07e-01 100.0% 83.3%
3323984 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.67 58.0 3.95e-01 100.0% 29.7%
3441677 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.20e-01 98.0% 98.0%
D2 medium residues 67-125
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 60.0 5.82e-01 100.0% 72.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.43e-01 100.0% 70.3%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 5.70e-01 100.0% 66.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 57.0 6.23e-01 96.6% 100.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 58.0 5.86e-01 100.0% 81.4%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 6.18e-01 100.0% 98.0%
4qucA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 48.0 4.96e-01 72.9% 75.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.71 61.0 6.00e-01 100.0% 88.9%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.39e-01 100.0% 63.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.82e-01 100.0% 90.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.16e-01 100.0% 64.3%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.36e-01 100.0% 91.8%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.79e-01 100.0% 88.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.23e-01 100.0% 91.7%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.72e-01 100.0% 79.2%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.75e-01 100.0% 93.0%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.27e-01 100.0% 69.5%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 4.95e-01 100.0% 76.7%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 5.07e-01 100.0% 89.8%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 47.0 3.80e-01 72.9% 77.5%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 5.43e-01 100.0% 94.7%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.40e-01 100.0% 96.2%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 54.0 5.55e-01 98.3% 100.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 49.0 4.93e-01 100.0% 81.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.83e-01 100.0% 75.8%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 3.67e-01 79.7% 90.6%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 5.21e-01 100.0% 90.3%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 57.0 5.18e-01 100.0% 79.2%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 54.0 5.00e-01 100.0% 77.6%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 47.0 4.83e-01 94.9% 87.5%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.61 42.0 3.69e-01 100.0% 44.9%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.08e-01 79.7% 93.8%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.61 52.0 4.63e-01 100.0% 78.9%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 49.0 4.48e-01 89.8% 93.7%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 4.27e-01 86.4% 66.7%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 40.0 4.13e-01 72.9% 82.5%
5bncA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.58 51.0 4.39e-01 98.3% 78.5%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 44.0 3.99e-01 83.1% 86.6%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.16e-01 88.1% 72.7%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 42.0 4.08e-01 88.1% 70.1%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 43.0 4.44e-01 96.6% 89.3%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.56 42.0 3.93e-01 83.1% 97.4%
1vlrA01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.56 45.0 3.79e-01 86.4% 86.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 42.0 4.12e-01 86.4% 74.2%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.56 48.0 4.50e-01 100.0% 85.5%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 42.0 4.40e-01 96.6% 98.0%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 4.09e-01 88.1% 74.6%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 40.0 4.15e-01 96.6% 94.2%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 42.0 4.23e-01 94.9% 89.8%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 37.0 3.78e-01 89.8% 75.9%
5h1kA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.81e-01 96.6% 22.9%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 45.0 3.44e-01 94.9% 73.6%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.97e-01 88.1% 75.8%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 39.0 3.87e-01 88.1% 76.6%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 38.0 3.80e-01 96.6% 78.1%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.47e-01 96.6% 57.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.51 42.0 4.36e-01 96.6% 100.0%
8hmcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.69e-01 94.9% 34.5%
1e8cA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 39.0 2.73e-01 89.8% 80.7%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.51 41.0 4.07e-01 96.6% 89.1%
2glxA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 40.0 2.87e-01 93.2% 69.2%
6i7eA01 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 39.0 2.84e-01 86.4% 92.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821919 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.89 62.0 6.23e-01 100.0% 71.7%
4942163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 66.0 6.36e-01 100.0% 72.3%
4354770 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.85 66.0 6.23e-01 100.0% 70.0%
3619215 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 64.0 5.24e-01 100.0% 47.0%
4547820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 63.0 5.11e-01 100.0% 44.8%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 65.0 6.32e-01 100.0% 75.4%
3274582 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.84 63.0 6.54e-01 100.0% 85.5%
4644007 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.83 65.0 6.52e-01 100.0% 83.1%
3866505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 62.0 6.43e-01 100.0% 85.5%
4983006 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 61.0 5.96e-01 100.0% 72.3%
5029655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 63.0 6.34e-01 100.0% 81.7%
4467360 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 63.0 6.34e-01 100.0% 81.7%
3170251 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.81 60.0 4.46e-01 100.0% 32.9%
4621153 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 61.0 6.16e-01 100.0% 81.7%
3504417 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 59.0 5.10e-01 100.0% 52.2%
3517415 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.74 61.0 5.89e-01 100.0% 80.0%
3505589 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.74 61.0 4.73e-01 100.0% 43.3%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 59.0 3.69e-01 100.0% 16.0%
3237640 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.73 61.0 4.89e-01 100.0% 48.2%
3398023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.13e-01 100.0% 30.3%
3408588 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.70 55.0 5.19e-01 100.0% 71.4%
4957350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 4.81e-01 100.0% 69.2%
4499953 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 48.0 4.84e-01 100.0% 73.3%
4953913 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 49.0 4.95e-01 100.0% 76.7%
3939881 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 48.0 4.47e-01 86.4% 60.0%
3888226 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 57.0 5.33e-01 100.0% 76.0%
2121553 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 57.0 5.40e-01 100.0% 81.4%
3914462 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 59.0 5.14e-01 100.0% 67.8%
3172122 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 59.0 5.87e-01 100.0% 98.3%
3928985 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 58.0 5.04e-01 100.0% 65.6%
4504508 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.65 48.0 4.33e-01 86.4% 56.5%
4973749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.42e-01 100.0% 67.1%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.63 54.0 4.73e-01 100.0% 64.4%
5043053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 48.0 3.96e-01 83.1% 81.9%
4012002 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.14e-01 100.0% 84.3%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.62 51.0 4.69e-01 100.0% 70.1%
5062333 375.1.1.83 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB 0.62 42.0 4.12e-01 78.0% 64.6%
3910933 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.62 48.0 4.79e-01 96.6% 83.3%
3964560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.78e-01 100.0% 78.6%
3889621 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.60 42.0 4.27e-01 86.4% 75.0%
4407054 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.58 45.0 4.54e-01 96.6% 85.0%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.58 49.0 4.22e-01 100.0% 60.0%
4182769 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.57 37.0 3.75e-01 96.6% 65.0%
3883586 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.57 43.0 4.03e-01 88.1% 65.3%
3589263 2.1.1.222 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_YrrC 0.57 40.0 3.74e-01 78.0% 92.5%
3280354 3699.1.1.0 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain 0.57 41.0 4.25e-01 94.9% 85.5%
5013328 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.57 44.0 4.38e-01 96.6% 86.7%
5798 519.1.1.1 a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.56 45.0 3.75e-01 86.4% 84.2%
3887159 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.56 44.0 4.31e-01 86.4% 78.5%
3235792 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 43.0 2.71e-01 84.7% 45.2%
3512963 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 47.0 2.85e-01 96.6% 17.7%
3969368 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 3.83e-01 94.9% 82.7%
3595486 10.13.1.0 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.55 48.0 3.48e-01 100.0% 85.7%
4271291 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 45.0 4.30e-01 91.5% 90.0%
5077089 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 4.43e-01 96.6% 90.0%
4962459 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 4.09e-01 100.0% 83.0%
3641328 206.1.1.15 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin 0.54 44.0 2.93e-01 93.2% 32.5%
5068500 2003.1.3.10 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_oxidored 0.54 45.0 3.17e-01 93.2% 56.2%
4039571 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.53 39.0 4.00e-01 96.6% 89.1%
3518768 316.1.1.14 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD 0.53 42.0 2.89e-01 88.1% 42.9%
3899072 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.52 39.0 3.77e-01 88.1% 70.0%
5045295 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.52 44.0 3.88e-01 96.6% 72.2%
4980907 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.50 40.0 2.99e-01 96.6% 56.2%
D3 medium residues 144-194
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.59 41.0 3.02e-01 76.5% 77.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 4.11e-01 100.0% 81.6%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.55 44.0 3.84e-01 100.0% 94.7%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 36.0 2.94e-01 70.6% 97.2%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.12e-01 84.3% 85.5%
3iteB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.54 40.0 2.40e-01 82.4% 16.6%
4byfC02 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 2.90e-01 84.3% 30.4%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.15e-01 84.3% 86.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 39.0 4.06e-01 100.0% 87.5%
2hf1A01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 36.0 3.59e-01 72.5% 85.5%
3a7rA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 41.0 2.75e-01 94.1% 29.0%
2dr3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 36.0 2.44e-01 74.5% 88.4%
3fcxB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 38.0 2.49e-01 82.4% 47.6%
2glxA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 42.0 2.89e-01 98.0% 75.8%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 37.0 2.80e-01 78.4% 95.3%
4kv7A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 38.0 2.87e-01 90.2% 94.9%
2ot9A01 3.10.640.10 Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain 0.51 37.0 2.60e-01 78.4% 90.3%
5i47B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 38.0 3.15e-01 84.3% 54.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4010317 4.1.1.395 beta barrels › SH3 › SH3 › SH3 › PF27398 0.59 40.0 3.80e-01 100.0% 58.5%
4025576 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 47.0 3.17e-01 100.0% 75.9%
3789270 5.1.4.115 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CRT10 0.58 48.0 2.82e-01 100.0% 90.4%
4451993 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 40.0 3.90e-01 100.0% 66.7%
5074749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 40.0 3.70e-01 100.0% 57.1%
3565792 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 45.0 2.95e-01 100.0% 79.6%
3520059 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 45.0 3.59e-01 98.0% 95.0%
4499953 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 40.0 3.86e-01 100.0% 66.7%
5032659 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.54 37.0 2.45e-01 74.5% 84.8%
5046787 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 37.0 2.40e-01 72.5% 35.5%
3762028 6.1.1.29 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CysR_MRC2_N 0.53 36.0 2.75e-01 70.6% 37.9%
4967485 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.53 36.0 2.38e-01 70.6% 86.5%
3281971 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 42.0 2.81e-01 98.0% 85.0%
5076246 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.53 35.0 2.34e-01 70.6% 84.8%
4979585 2003.1.5.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.52 35.0 2.30e-01 72.5% 29.0%
4953054 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.33e-01 100.0% 54.7%
4069793 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 35.0 3.28e-01 74.5% 81.4%
2568617 5098.1.1.1 a+b two layers › beta-grasp domain in anthrax protective antigen › beta-grasp domain in anthrax protective antigen › beta-grasp domain in anthrax protective antigen › Binary_toxB_3 0.51 40.0 3.20e-01 90.2% 91.8%
4269844 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 37.0 3.39e-01 78.4% 84.3%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 40.0 3.80e-01 100.0% 72.3%
4933693 2003.1.5.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.50 34.0 2.23e-01 72.5% 27.4%
4975764 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.50 35.0 3.30e-01 100.0% 57.1%
4470870 387.2.1.0 few secondary structure elements › omega toxin-like 0.50 36.0 4.00e-01 82.4% 97.5%
3214412 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.50 36.0 2.85e-01 82.4% 60.8%
4208040 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.50 37.0 3.36e-01 80.4% 78.1%