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DQ500118.1__ABF71340.1__RM163_092__00092
Bact-VirDQ500118.1__ABF71340.1__RM163_092__00092
Identity
- Accession:
- DQ500118 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-93
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 5.25e-01 | 95.7% | 83.1% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 45.0 | 4.11e-01 | 95.7% | 57.4% |
| 3bbaA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.61 | 51.0 | 3.62e-01 | 100.0% | 36.2% |
| 4qv2A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.60 | 51.0 | 4.42e-01 | 98.6% | 92.4% |
| 3h7tB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 50.0 | 4.31e-01 | 98.6% | 72.1% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 47.0 | 4.17e-01 | 95.7% | 59.4% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.78e-01 | 92.9% | 95.8% |
| 3icuA01 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.58 | 43.0 | 3.44e-01 | 82.9% | 96.3% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 50.0 | 4.06e-01 | 100.0% | 48.9% |
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 47.0 | 3.39e-01 | 90.0% | 99.5% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 49.0 | 4.91e-01 | 97.1% | 97.2% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.57 | 47.0 | 4.16e-01 | 97.1% | 98.2% |
| 1wczA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 44.0 | 3.88e-01 | 95.7% | 53.9% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.57 | 46.0 | 3.42e-01 | 92.9% | 33.7% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 47.0 | 4.23e-01 | 95.7% | 65.4% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 46.0 | 4.15e-01 | 95.7% | 68.2% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 3.91e-01 | 90.0% | 78.4% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 3.91e-01 | 87.1% | 81.0% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 48.0 | 4.44e-01 | 100.0% | 79.3% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 44.0 | 3.36e-01 | 85.7% | 63.7% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 45.0 | 4.07e-01 | 95.7% | 67.3% |
| 2zl7A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.54 | 44.0 | 4.15e-01 | 97.1% | 97.8% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.86e-01 | 95.7% | 62.3% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 42.0 | 3.39e-01 | 85.7% | 66.4% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.53 | 44.0 | 3.90e-01 | 98.6% | 97.4% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 44.0 | 3.94e-01 | 97.1% | 100.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 4.02e-01 | 82.9% | 91.9% |
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.52 | 38.0 | 2.98e-01 | 81.4% | 44.8% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 44.0 | 3.93e-01 | 98.6% | 98.1% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 42.0 | 3.81e-01 | 95.7% | 65.7% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 38.0 | 3.36e-01 | 82.9% | 51.7% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.42e-01 | 97.1% | 49.0% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.29e-01 | 84.3% | 100.0% |
| 1zj8A04 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.50 | 39.0 | 3.19e-01 | 88.6% | 72.3% |
| 1a8pA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 42.0 | 3.90e-01 | 98.6% | 98.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3236689 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 48.0 | 5.28e-01 | 94.3% | 100.0% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.64 | 53.0 | 5.24e-01 | 94.3% | 86.7% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.63 | 51.0 | 5.23e-01 | 95.7% | 96.9% |
| 3710913 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 4.62e-01 | 100.0% | 77.5% |
| 3289944 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.63 | 53.0 | 4.93e-01 | 95.7% | 75.6% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.61 | 50.0 | 5.08e-01 | 100.0% | 92.9% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.61 | 49.0 | 4.21e-01 | 98.6% | 54.8% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.61 | 51.0 | 5.06e-01 | 95.7% | 93.3% |
| 4949773 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.60 | 52.0 | 4.18e-01 | 100.0% | 57.9% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 47.0 | 4.55e-01 | 92.9% | 77.5% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 48.0 | 4.76e-01 | 92.9% | 96.0% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 46.0 | 4.55e-01 | 88.6% | 92.0% |
| 3407091 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 50.0 | 3.44e-01 | 100.0% | 78.5% |
| 3823780 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.58 | 48.0 | 4.73e-01 | 92.9% | 88.0% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.72e-01 | 91.4% | 100.0% |
| 3781440 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.58 | 48.0 | 4.68e-01 | 95.7% | 93.8% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 46.0 | 4.62e-01 | 90.0% | 97.1% |
| 3494683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.68e-01 | 95.7% | 92.9% |
| 3841414 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 47.0 | 4.71e-01 | 100.0% | 95.7% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 45.0 | 3.83e-01 | 90.0% | 73.3% |
| 3554105 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 43.0 | 3.58e-01 | 88.6% | 77.8% |
| 3315951 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.55 | 42.0 | 4.12e-01 | 85.7% | 96.2% |
| 3877687 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 43.0 | 3.56e-01 | 85.7% | 77.7% |
| 4872941 | 10.2.1.43 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C | 0.55 | 46.0 | 4.00e-01 | 100.0% | 94.1% |
| 3932819 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 47.0 | 4.03e-01 | 100.0% | 91.3% |
| 3831299 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 43.0 | 4.35e-01 | 92.9% | 100.0% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.51 | 41.0 | 3.36e-01 | 95.7% | 45.2% |
| 3321071 | 101.1.2.115 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDC27 | 0.51 | 44.0 | 3.57e-01 | 100.0% | 54.3% |
| 5075917 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.51 | 40.0 | 3.31e-01 | 94.3% | 44.7% |
| 3253075 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 38.0 | 3.27e-01 | 84.3% | 69.2% |
| 4810251 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 37.0 | 2.62e-01 | 82.9% | 22.6% |