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DQ529280.1__ABF72634.1__PHG25ORF075c__00079

Bact-Vir

DQ529280.1__ABF72634.1__PHG25ORF075c__00079

Identity

Accession:
DQ529280 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tulanevirus› Aeromonas_phage_25

TaxID: 2911441

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-35
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 58.0 5.03e-01 100.0% 53.6%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 4.63e-01 97.0% 47.6%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.69 52.0 4.05e-01 90.9% 95.2%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.68 51.0 3.55e-01 81.8% 30.4%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.68 50.0 4.48e-01 93.9% 54.9%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.68 55.0 3.63e-01 100.0% 51.6%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 49.0 4.18e-01 93.9% 45.2%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 53.0 3.30e-01 100.0% 18.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 4.55e-01 93.9% 54.9%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 54.0 3.64e-01 100.0% 45.9%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 53.0 3.84e-01 100.0% 62.4%
3wbiA04 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 51.0 3.42e-01 90.9% 62.8%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 51.0 4.27e-01 100.0% 48.5%
2iz4A02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 46.0 4.37e-01 78.8% 61.9%
2pptA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.61 44.0 4.40e-01 84.8% 94.6%
2ezvA02 2.40.50.610 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type II restriction enzyme SfiI, DNA-recognition domain 0.61 45.0 3.63e-01 84.8% 71.4%
1y0nA00 1.10.10.610 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like 0.61 44.0 3.80e-01 100.0% 90.1%
6rwcA02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 42.0 4.16e-01 81.8% 64.1%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 45.0 4.04e-01 87.9% 96.1%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.60 44.0 3.06e-01 97.0% 25.2%
1tk7A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.59 49.0 4.77e-01 97.0% 89.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 3.84e-01 100.0% 50.8%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 41.0 3.43e-01 78.8% 77.6%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 43.0 3.97e-01 100.0% 57.9%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 44.0 2.93e-01 90.9% 64.6%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.57 42.0 3.02e-01 84.8% 53.0%
4mb7A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 38.0 2.64e-01 75.8% 19.7%
1ya5T01 2.20.160.10 Mainly Beta › Single Sheet › titin filament fold › titin domain like 0.56 42.0 3.35e-01 97.0% 63.1%
2r44A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 40.0 2.61e-01 72.7% 38.9%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 39.0 2.40e-01 81.8% 12.6%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 43.0 2.61e-01 100.0% 20.7%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.55 38.0 2.26e-01 87.9% 61.2%
4bgdA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.50e-01 81.8% 57.6%
1vw4H00 3.90.1180.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 0.54 38.0 2.61e-01 81.8% 19.6%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.54 42.0 2.92e-01 100.0% 37.1%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.22e-01 78.8% 87.3%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 38.0 2.91e-01 72.7% 36.6%
3hwuA00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.53 39.0 2.76e-01 93.9% 27.1%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.52 37.0 3.18e-01 93.9% 77.0%
6aqgD02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 41.0 2.40e-01 100.0% 28.9%
2j8hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 2.73e-01 72.7% 24.7%
3rhtA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 38.0 2.35e-01 97.0% 88.9%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.51 36.0 2.69e-01 81.8% 79.1%
2m85A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 38.0 3.29e-01 97.0% 52.3%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.50 37.0 3.31e-01 87.9% 54.4%
4kdcA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 38.0 2.38e-01 90.9% 26.7%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.50 37.0 2.69e-01 100.0% 45.9%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023601 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.83 61.0 4.51e-01 78.8% 38.7%
4947463 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.71 50.0 3.60e-01 75.8% 30.5%
None — 0.70 49.0 2.99e-01 72.7% 13.0%
4003785 5.1.3.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.69 51.0 3.03e-01 87.9% 10.2%
3192072 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 49.0 4.49e-01 81.8% 71.4%
3926998 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.69 51.0 4.06e-01 97.0% 36.3%
3801752 375.1.1.269 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29332 0.68 57.0 5.10e-01 100.0% 98.0%
3992658 5.1.4.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.67 51.0 3.17e-01 90.9% 15.5%
4957484 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 53.0 3.94e-01 100.0% 50.0%
4868007 5.1.2.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › NHL 0.67 58.0 3.43e-01 100.0% 96.9%
3338602 2008.1.1.107 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.65 48.0 3.06e-01 84.8% 38.4%
3941982 205.1.1.35 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.65 48.0 3.60e-01 81.8% 67.8%
3582223 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.65 46.0 4.43e-01 78.8% 72.5%
4113442 101.26.1.2 ↗ alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 0.64 45.0 2.93e-01 72.7% 34.5%
4379527 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.64 44.0 3.38e-01 78.8% 27.1%
3489808 59.1.1.9 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF 0.64 50.0 4.08e-01 90.9% 85.7%
3940037 389.1.1.108 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29136 0.62 44.0 4.22e-01 78.8% 75.0%
3255365 386.1.1.18 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.61 43.0 3.85e-01 87.9% 52.0%
3907533 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.60 41.0 4.08e-01 78.8% 65.0%
3606741 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 43.0 4.29e-01 81.8% 97.1%
3278307 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.59 43.0 2.96e-01 90.9% 19.3%
4960763 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.59 42.0 2.72e-01 84.8% 48.8%
3701625 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.59 41.0 3.85e-01 72.7% 51.1%
5041606 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 44.0 3.71e-01 87.9% 80.0%
3265019 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 47.0 3.46e-01 100.0% 49.5%
3231480 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.58 42.0 3.94e-01 81.8% 64.4%
4977355 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.58 48.0 3.05e-01 100.0% 24.2%
3501098 4126.1.1.1 ↗ a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA 0.58 43.0 2.66e-01 100.0% 12.5%
3512515 247.1.1.45 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_2 0.57 41.0 2.50e-01 97.0% 17.5%
3260588 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 42.0 3.90e-01 93.9% 74.0%
3729675 5050.1.1.2 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.56 39.0 2.20e-01 78.8% 4.7%
3266965 378.1.2.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 0.56 38.0 3.37e-01 81.8% 80.0%
2426645 375.8.1.1 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B 0.55 39.0 3.51e-01 81.8% 56.4%
4180555 4203.1.1.1 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 0.55 41.0 3.64e-01 87.9% 54.5%
4999659 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 41.0 3.69e-01 75.8% 50.0%
3514831 389.1.1.9 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.54 40.0 3.82e-01 75.8% 67.5%
4987043 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.54 38.0 2.26e-01 81.8% 16.2%
3657815 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 41.0 2.54e-01 81.8% 11.1%
3487842 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.53 36.0 3.67e-01 93.9% 71.4%
3706365 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 38.0 3.51e-01 84.8% 82.0%
3388125 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 3.56e-01 84.8% 88.9%
3928298 389.1.1.1 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.52 36.0 3.53e-01 78.8% 70.0%
3790194 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.51 39.0 3.59e-01 78.8% 48.9%
4366971 4203.1.1.1 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 0.51 39.0 3.45e-01 84.8% 50.9%
4148130 4203.1.1.1 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 0.51 37.0 3.37e-01 87.9% 56.4%
3602195 1057.1.1.1 ↗ a+b two layers › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › PI-TkoII_IV 0.51 36.0 2.53e-01 75.8% 18.6%
3986842 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 34.0 2.98e-01 72.7% 34.3%
3797637 4291.1.1.0 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein 0.50 32.0 1.99e-01 97.0% 18.2%
3595497 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 34.0 2.16e-01 93.9% 12.6%