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DQ832317.1__ABI79243.1__X__00173
Bact-VirDQ832317.1__ABI79243.1__X__00173
Identity
- Accession:
- DQ832317 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 399183
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-32
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 50.0 | 4.60e-01 | 78.1% | 59.1% |
| 2bn8A00 | 3.30.730.20 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › Cell division activator CedA | 0.70 | 54.0 | 4.48e-01 | 96.9% | 61.2% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.68 | 51.0 | 3.47e-01 | 87.5% | 63.2% |
| 2vhlA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 47.0 | 2.72e-01 | 81.2% | 7.6% |
| 2vy0B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 47.0 | 2.81e-01 | 75.0% | 99.2% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 50.0 | 3.44e-01 | 100.0% | 33.8% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.62 | 44.0 | 3.67e-01 | 81.2% | 90.9% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 44.0 | 3.62e-01 | 84.4% | 83.8% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 44.0 | 4.26e-01 | 81.2% | 64.1% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 45.0 | 2.83e-01 | 93.8% | 17.2% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.59 | 48.0 | 3.56e-01 | 100.0% | 60.4% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 3.59e-01 | 75.0% | 77.6% |
| 2qj6A01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.58 | 42.0 | 2.90e-01 | 84.4% | 25.8% |
| 2re3B03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.58 | 41.0 | 4.13e-01 | 78.1% | 73.3% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 44.0 | 3.00e-01 | 96.9% | 67.3% |
| 2dnlA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 43.0 | 3.31e-01 | 90.6% | 36.0% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.57e-01 | 84.4% | 51.1% |
| 4j9jA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 39.0 | 2.46e-01 | 84.4% | 13.7% |
| 3tdnA00 | 3.40.50.12600 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 39.0 | 2.87e-01 | 84.4% | 25.6% |
| 2pliA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 39.0 | 3.10e-01 | 87.5% | 41.7% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 2.81e-01 | 90.6% | 25.5% |
| 1bpeA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.53 | 38.0 | 3.46e-01 | 93.8% | 57.6% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 39.0 | 3.05e-01 | 90.6% | 41.4% |
| 6jyxA01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.53 | 38.0 | 2.73e-01 | 81.2% | 42.7% |
| 1vjnA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 37.0 | 2.40e-01 | 81.2% | 27.3% |
| 3k6qA02 | 3.30.160.620 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 2.85e-01 | 84.4% | 36.0% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 36.0 | 2.01e-01 | 87.5% | 5.4% |
| 5g5tA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 34.0 | 2.27e-01 | 84.4% | 32.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3540537 | 376.1.3.26 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DCR | 0.74 | 58.0 | 4.51e-01 | 90.6% | 90.7% |
| 3937875 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.74 | 58.0 | 4.22e-01 | 93.8% | 63.0% |
| 3933890 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.72 | 59.0 | 4.23e-01 | 96.9% | 64.0% |
| 3507069 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.72 | 58.0 | 3.99e-01 | 100.0% | 69.2% |
| 4063517 | 2498.1.1.40 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M66 | 0.71 | 53.0 | 3.12e-01 | 87.5% | 95.4% |
| 1171970 | 4294.1.1.10 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske_4 | 0.71 | 50.0 | 4.29e-01 | 81.2% | 79.3% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.70 | 53.0 | 4.46e-01 | 84.4% | 49.1% |
| 5051640 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.70 | 53.0 | 3.53e-01 | 90.6% | 40.0% |
| 3992248 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.68 | 50.0 | 4.35e-01 | 75.0% | 53.1% |
| 3998974 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.68 | 47.0 | 4.63e-01 | 75.0% | 62.9% |
| 3521805 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.66 | 48.0 | 3.86e-01 | 87.5% | 44.0% |
| 3507373 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.66 | 47.0 | 3.70e-01 | 78.1% | 68.0% |
| 3881538 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.66 | 51.0 | 3.15e-01 | 93.8% | 18.6% |
| 5015831 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.65 | 46.0 | 3.07e-01 | 78.1% | 17.8% |
| 3566388 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 45.0 | 4.26e-01 | 84.4% | 60.5% |
| 3507374 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.63 | 48.0 | 3.69e-01 | 81.2% | 77.5% |
| 3941210 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.62 | 45.0 | 3.47e-01 | 90.6% | 63.2% |
| 3362575 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 48.0 | 2.65e-01 | 93.8% | 6.7% |
| 3516364 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.61 | 45.0 | 4.26e-01 | 75.0% | 65.0% |
| 3798336 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.61 | 43.0 | 3.49e-01 | 78.1% | 37.1% |
| 3334492 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.61 | 49.0 | 3.86e-01 | 96.9% | 48.8% |
| 3508453 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 46.0 | 4.52e-01 | 75.0% | 74.3% |
| 3655352 | 377.6.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › SBT domain › SBT domain › SBP | 0.59 | 48.0 | 4.10e-01 | 100.0% | 88.3% |
| 3480502 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 42.0 | 2.37e-01 | 100.0% | 10.2% |
| 4339767 | 6148.1.1.1 ↗ | few secondary structure elements › N-terminal domain of EpCAM › N-terminal domain of EpCAM › N-terminal domain of EpCAM › EpCAM_N | 0.59 | 42.0 | 4.17e-01 | 100.0% | 95.0% |
| 3519409 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.59 | 42.0 | 4.18e-01 | 75.0% | 74.3% |
| 3933997 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.59 | 45.0 | 3.52e-01 | 93.8% | 68.2% |
| 4136892 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 41.0 | 3.42e-01 | 93.8% | 50.0% |
| 5035557 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 42.0 | 3.76e-01 | 84.4% | 80.0% |
| 3634974 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 2.39e-01 | 87.5% | 60.6% |
| 3699638 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 2.23e-01 | 96.9% | 37.0% |
| 3699985 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 37.0 | 2.23e-01 | 93.8% | 75.0% |
| 3327653 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.52 | 36.0 | 2.19e-01 | 78.1% | 67.0% |
| 3614159 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.22e-01 | 100.0% | 30.4% |
| 5066451 | 2484.1.1.79 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Raco_middle | 0.50 | 37.0 | 2.44e-01 | 90.6% | 84.2% |