←Back to structures

DQ840344.2__ABJ09635.1__X__00038

Bact-Vir

DQ840344.2__ABJ09635.1__X__00038

Identity

Accession:
DQ840344 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Svunavirus› Bacillus_phage_1

TaxID: 2785079

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-164
PDB
Domain cluster: rep: MZ501270.1__QZA71203.1__AH07_16__00016__D27-58_74-163
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.68 23.0 4.06e-01 76.5% 95.3%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 28.0 3.87e-01 78.8% 75.8%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.66 42.0 4.79e-01 93.9% 86.5%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 31.0 3.83e-01 77.3% 75.9%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.58 42.0 4.18e-01 78.8% 71.9%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 35.0 4.30e-01 76.5% 98.8%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 39.0 4.13e-01 78.8% 78.2%
5hsqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 39.0 3.96e-01 78.8% 72.1%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 37.0 3.89e-01 81.8% 74.6%
5llwA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 38.0 4.39e-01 75.8% 100.0%
4pc3C02 3.30.479.20 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain 0.55 27.0 3.31e-01 74.2% 70.9%
7wvzA03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 44.0 3.54e-01 97.0% 43.0%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 4.30e-01 100.0% 100.0%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 36.0 4.16e-01 81.8% 97.8%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 32.0 3.62e-01 97.7% 77.3%
3n4rA00 3.90.1150.80 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.54 31.0 3.53e-01 97.0% 77.4%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 37.0 3.91e-01 82.6% 80.2%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 33.0 3.76e-01 77.3% 81.6%
3weoA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 48.0 3.87e-01 100.0% 73.9%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 37.0 3.93e-01 82.6% 83.3%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 37.0 3.91e-01 84.8% 80.7%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.52 40.0 3.59e-01 85.6% 59.3%
4umwA04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.52 33.0 3.55e-01 100.0% 72.4%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 36.0 3.86e-01 72.7% 82.9%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 36.0 3.76e-01 84.1% 79.8%
1yb3A00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 47.0 4.33e-01 100.0% 80.0%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 36.0 3.76e-01 82.6% 80.7%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 34.0 4.01e-01 78.8% 100.0%
3db2B02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 37.0 3.25e-01 77.3% 52.7%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4104199 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.67 47.0 5.40e-01 86.4% 100.0%
184669 331.2.1.2 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF2218 0.66 42.0 4.79e-01 93.9% 86.5%
3662612 304.48.1.37 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 0.63 40.0 3.14e-01 94.7% 32.3%
4029539 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 41.0 4.30e-01 92.4% 75.0%
3628286 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.61 42.0 4.29e-01 86.4% 72.3%
3738165 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.61 40.0 4.09e-01 87.1% 69.6%
4946228 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 36.0 3.66e-01 76.5% 60.0%
5037689 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 39.0 4.36e-01 77.3% 84.8%
4527337 206.1.2.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.59 41.0 3.24e-01 71.2% 55.3%
4030652 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.58 35.0 3.37e-01 84.8% 51.3%
4944404 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 37.0 3.78e-01 98.5% 63.8%
4945022 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 4.36e-01 82.6% 91.0%
3924796 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.57 38.0 4.03e-01 82.6% 77.4%
4947581 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 33.0 3.59e-01 77.3% 70.0%
5079770 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 4.09e-01 85.6% 80.0%
3790606 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 39.0 4.00e-01 83.3% 75.0%
3507450 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.55 39.0 3.98e-01 83.3% 76.8%
3927907 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.54 34.0 4.14e-01 80.3% 97.6%
3215570 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.54 38.0 3.96e-01 82.6% 78.3%
3741339 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 37.0 4.22e-01 71.2% 97.8%
3491036 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.54 35.0 4.18e-01 82.6% 97.8%
3397015 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.54 45.0 4.47e-01 93.2% 85.0%
4964955 223.2.1.63 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 0.53 40.0 4.07e-01 88.6% 80.6%
78361 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 37.0 3.90e-01 82.6% 80.2%
3265738 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 38.0 3.97e-01 84.8% 79.2%
5073548 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 37.0 4.20e-01 83.3% 95.0%
3414531 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 35.0 4.04e-01 78.8% 93.7%
3704789 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 35.0 3.97e-01 78.8% 90.8%
5048994 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 36.0 3.75e-01 82.6% 75.8%
2140453 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 37.0 3.82e-01 84.1% 76.6%
5064298 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 36.0 3.81e-01 81.8% 79.1%
5073565 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 34.0 4.04e-01 78.8% 97.8%
4002901 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.52 40.0 4.01e-01 89.4% 77.9%
4999961 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.80e-01 85.6% 78.9%
2779090 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 34.0 3.95e-01 78.8% 93.8%
4971324 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 34.0 3.98e-01 78.8% 97.8%
3603559 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 34.0 3.72e-01 78.8% 80.9%
5065002 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 37.0 3.81e-01 86.4% 78.4%
3233889 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 40.0 3.21e-01 83.3% 44.9%
5052178 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 34.0 3.73e-01 78.8% 81.8%
5046813 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 3.73e-01 82.6% 81.7%
4947218 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 3.78e-01 72.0% 83.3%
3492395 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 34.0 3.93e-01 75.8% 98.9%
5049690 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 38.0 3.75e-01 88.6% 74.3%